Gene Aave_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1185 
Symbol 
ID4665460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1305936 
End bp1306691 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID639822379 
Product3-oxoacyl-[acyl-carrier-protein] reductase 
Protein accessionYP_969551 
Protein GI120609873 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.161455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTT CGAATTCCCC TGACAACGCC GCCCGCATCG CCCTGGTGAC GGGTGCCTCC 
CGCGGCATCG GTGCCGCCAT CGCTGCCGAA CTGGCGGCGC GGGGCTTCCG CGTCGTCGGC
ACGGCGACCA CCGAAGACGG CGCGCAGCGC ATCACCCAGG CGCTGTCCGC CCACGAAGGC
TGCCGGGGCG CCGCCGTCGA CGTGAACGAC GCCGCCGCGC TGGATGCGCT GATCGACGGC
ATCGTGAAAG AGCAGGGCGG CCTGCATGTG CTGGTCAACA ACGCCGGCAT CACCCGCGAC
CAGATTGCCA TGCGCATGAA GGACGACGAC TGGGATGCCG TGCTCGACAC GAATCTGAAG
GCGGTATTCC GCGCCTGCCG GGCCGTCATG CGGCCGATGA TGAAGCAGCG CTATGGGCGC
ATCGTCAACA TCACGAGCGT GGTGGGTGCC TCGGGCAATC CGGGCCAGGC CAACTACGCC
GCAGCCAAGG CGGGTCTTGC CGGCATGACG CGCTCGCTGG CCCGCGAGCT GGGCAGCCGT
GGCATCACGG TGAACTGCGT GGCCCCCGGT TTCATCCGCA CCGACATGAC CGCCGAGCTC
TCCGAGGAGC AGCACAAGGC ACTGCAGACG CAGATTCCGA TGGGGCACAT GGGGCAGCCG
TCGGACATCG CCAAGGCCGT CGCCTACCTC GCATCGGACG ACGCGGGCTA TGTGACCGGC
CAGGAGTTGC ATGTCAATGG CGGCATGTAC ATGTAA
 
Protein sequence
MTLSNSPDNA ARIALVTGAS RGIGAAIAAE LAARGFRVVG TATTEDGAQR ITQALSAHEG 
CRGAAVDVND AAALDALIDG IVKEQGGLHV LVNNAGITRD QIAMRMKDDD WDAVLDTNLK
AVFRACRAVM RPMMKQRYGR IVNITSVVGA SGNPGQANYA AAKAGLAGMT RSLARELGSR
GITVNCVAPG FIRTDMTAEL SEEQHKALQT QIPMGHMGQP SDIAKAVAYL ASDDAGYVTG
QELHVNGGMY M