Gene Aave_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1176 
Symbol 
ID4667240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1298954 
End bp1299331 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content67% 
IMG OID639822370 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_969542 
Protein GI120609864 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.262842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCCCGGGAGC GGCCATTCCC CTGTGCCCGA GCGATGCGCT GCGGGAGGGC 
GGCGACGCCG TTCCCTTCGA TGTCGTGTGG GCCGGGCAGC CCTGCCGTGC CTTCGCCATC
CGCTACCAGG GGCAGGTCCA TGCCTACCTG AACCAGTGCA CGCACGTGCC CATGGAGATG
GATTGGCAGC CCAACCGCTT CTTCGACGAC ACGGGGCACT GGCTGCTGTG CGCTTCGCAC
GGCGCTGCCT ACCGCCCCGA TACCGGCGCC TGTGCCGGCG GCCCCTGCCG TGGCGGACTG
GTGAAGATCG CAATTTCGGA AGAGTCCGGA GTGGTGCGCT GGCATACTGG CTCCCAATTG
CAACCCGTGG AATTCTGA
 
Protein sequence
MTDAPGAAIP LCPSDALREG GDAVPFDVVW AGQPCRAFAI RYQGQVHAYL NQCTHVPMEM 
DWQPNRFFDD TGHWLLCASH GAAYRPDTGA CAGGPCRGGL VKIAISEESG VVRWHTGSQL
QPVEF