| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1173 |
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| Symbol | |
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| ID | 4665940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1293504 |
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| End bp | 1296626 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639822367 |
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| Product | ribonuclease E |
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| Protein accession | YP_969539 |
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| Protein GI | 120609861 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGA TGCTCATCAA TGCCACGCAG CCCGAAGAAC GGCGCCTCGC CATCGTGGAC
GGCCAGAAGC TGCTGGACTA CGAGATCGAG ATCGAGGGAC GCGAACAACG CAAGGGCAAC
ATCTACAAGG CGGTCGTCAC CCGCGTCGAG CCCAGCCTGG AAGCCTGCTT CGTGGATTAC
GGCGAGGACC GCCACGGCTT CCTGCCCTTC AAGGAAATCT CCCGCCAGTA TTTCGCCGAG
GGCGTTTCGC CCAGCCAGGC CCGCATCAAC GACGTGATCC GCGAAGGCCA GGAGCTGCTG
GTTCAGGTCG AGAAGGAAGA ACGCGGCAAC AAGGGCGCGG CCCTGACCAC CTTCGTGTCG
CTGGCCGGCC GCTACGTGGT GCTGATGCCC AACAACCCGC GCGGCGGCGG CGTGTCGCGC
CGCATCGAGG GCGAGGACCG TGCCGAACTC AAGGAGGCGA TGGACCAGCT CGAGTACCCG
AAGGGCATGA GCATCATCGC GCGCACCGCC GGCATCGGCC GCTCGGCGCC CGAGCTGCAA
TGGGACCTGA ACTACCTGCT CAAGCTCTGG ACCGCCATCG ACGGCGCCGC CAGGGGCGGC
AAGGGCGCCT TCCTGATCTA CCAGGAATCC TCCCTGGTGA TCCGCGCGAT CCGCGACTAC
TTCAACAACG ACATCGGCGA CATCCTCATC GATACGGACG ACATCTATGA ACAGGCGCAG
CAGTTCATGT CGCACGTCAT GCCCGAGCAT GCCGCCAAGG TCAAGCGCTA CCGCGACGAC
GCGGCGCTGT TCAGCCGCTT CCAGATCGAG CACCAGATCG AGTCCGCCTA CGCCCGCACG
GTGACCCTGC CCTCCGGCGG CGCCATCGTG ATCGACCACA CGGAAGCGCT GGTGTCCGTG
GACGTGAACT CGGCCCGCGC CATCAAGGGC GGCGACATCG AGGAGACCGC CACCCGCACC
AACCTGGAAG CCGCCGACGA GGTGGCCCGC CAGATGCGCC TGCGCGACCT GGGCGGCCTG
ATCGTGATCG ACTTCATCGA CATGGAGGAG AGCAAGAACC GCCGCGAGGT CGAGAACCGC
CTGCGCGACG CGCTGCGCCA GGACCGCGCC CGCGTGCAGT TCGGCACGAT CAGCAAGTTC
GGCCTGATGG AAATGAGCCG CCAGCGCCTG AAGCCCTCGC TGAGCGAAGG CGCGCACATC
CGCTGCCCGC GCTGCGACGG CACGGGCCAC GTGCGCGACA CGGAAGGCTT CTCGCTGCAG
ATCCTGCGCA TGATCCAGGA AGAGTCCATG AAGGACAACA CGGCCGCCGT GCACTGCCAG
GTGCCGGTGG AAGTGGCCTC GTTCCTGCTC AACGAGAAGC GCACCGAAAT CGCCAAGATC
GAACTCAAGC AGCGCGTGAG CGTGCTCATG GTCCCCAACA AGACCATGGA AACGCCCAAG
TACAAGCTCG AGCGCCTGAA GCACGACGAC CCGCGCCTGG ACCACATCGC CGCGAGCTAC
AAGCTGGCCG AGGAGATGGA GGACCCGACC ACGGTGACGC GCCGCTCCCA GGAGCCGACG
AACAAACAGA CCCCGGTGAT CAAGGGTGTG CTGCCCGATG CGCCGGCCCC GGTCGCCGAG
CCGCGCCCCG AAATGCCGCG CACGGCGGGC GCACGCAACG GCGCGCACGC GGCCGCCCCG
GCACAGCCGC CTGCACCGGC CCCCGCGCCG GCGCCGGCTG CGCCCCAGGA ACAGGGCTTC
TTCGCATGGC TCAAGAGCCT CTTCGGTTTC GGACCGCGTC CGGCTCCGGC ACCGGTGTCC
GCGCCGGTTG CGGCGCCTGC CCCCGCCCCT GCCGCCGACG CCCCGCGTGA CGGGCGCCGC
GGTGGAGGCC GGCGCGGCGG ACGCGACGGC AACGGCGGCG GTCGTGACGG GCAGCGCGAG
AACGGTGCCG CGGAAGGCCG CGGACGCCGC GGCGAGCGCG GAGAACGCCC CGAGCGTGCC
GAAGGCGAAG CGCCACGCAA CGGCCGGGGT CCGCGCGATG CCGAGGGCCG CGAAGGCCGG
CCGGCACGGG AGCGCGATCG CGACCGTGAA GGCGGACGCG AGAACGGACG CGATGCATCC
GTTCGCGCCG AAGGAGATTA CGCGCCGCGT AATGGCCGTG AAGGCCGTGA AGGCGGCCGC
GGCCGCGAGC GCCGGGAGTC CGGCGACGCT CCGCGCCAGC AGCCGCTGGG CACTGACGCC
GGCATGGGGG CCGTGGCCCC GGACGTCGGC ATCGAAGGCC AGGGTGCCGC CCCGCAGGAG
CGCGGCGAGC GGGGCCCTCG CAACGGCGAG CGCCGGGAAC GCCGGGAACG CGGCGGCGAC
CGCCGTCCGC GCGGAGAGGA AGGCCAGGCC GAGTTCGTGG ACACGTCCCC GATGGCCTCG
CTGCCCGATC TGGACCTGAC CGGCGGCGAA GCCGGCAGCC CGGCCACGGG CTCCACCCCG
GGCGAGGAGC CGCGCCGCGA ACGCCGGTCG CGCGACCGCT ATGGACGCGA CCGCCGGGAG
CGCGCGCCGC GTGAAGGCGC CGAGGTGGAA ACCGCACCGG TGACCGAGAC CACCACGGCG
CAGGCCGTGC AGGACGTGGC CGGCGAAGGC CCTGCCCAGG AAGCGCCGCG CCGCAGCTAC
TTCAGCCAGG GTGGCGGCGC CCCCGCGCCC ACCGCCGCGG CGGTGGCATC CGAAGCCTCG
CACGGCGAAG CGCCCGCGGA ACCTGCGCAA GCCCCCGCAG GCATCCCGGC GGCAGCGCCG
GCACCTGCCG TGGCCGCCGC CGCGGTGCCG GTCCCCGTGC CAGTCCCGGT CGCCACGCCA
GCGCCCGCAC CGGCCGCAGC CGCGGCCGTG CCGGGACTGC CACGCGTGCA GGCCTTCCAG
CTGCCGGTGG ATGAGCTGAA CCGGATCGCC GAAAGCTCGG GCCTGCAGTG GGTGAACTCC
GATGCGGAGA AGATCGCCGC CGCGCAGGCA GCGATCGCCG CGGAGCCCCG CCCGGTGCAT
GTGCCGCGCG AGCGGCCTCC GGCCGTCGTG CTGGACGAAG GTCCGCTGGT GCTCGTGGAA
ACACGCCGAG ATCTGCGCGA CCTGAAGCTG CCGTTCGAGC AGCAGCCCTC GTCCGTCGCC
TGA
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| Protein sequence | MKRMLINATQ PEERRLAIVD GQKLLDYEIE IEGREQRKGN IYKAVVTRVE PSLEACFVDY
GEDRHGFLPF KEISRQYFAE GVSPSQARIN DVIREGQELL VQVEKEERGN KGAALTTFVS
LAGRYVVLMP NNPRGGGVSR RIEGEDRAEL KEAMDQLEYP KGMSIIARTA GIGRSAPELQ
WDLNYLLKLW TAIDGAARGG KGAFLIYQES SLVIRAIRDY FNNDIGDILI DTDDIYEQAQ
QFMSHVMPEH AAKVKRYRDD AALFSRFQIE HQIESAYART VTLPSGGAIV IDHTEALVSV
DVNSARAIKG GDIEETATRT NLEAADEVAR QMRLRDLGGL IVIDFIDMEE SKNRREVENR
LRDALRQDRA RVQFGTISKF GLMEMSRQRL KPSLSEGAHI RCPRCDGTGH VRDTEGFSLQ
ILRMIQEESM KDNTAAVHCQ VPVEVASFLL NEKRTEIAKI ELKQRVSVLM VPNKTMETPK
YKLERLKHDD PRLDHIAASY KLAEEMEDPT TVTRRSQEPT NKQTPVIKGV LPDAPAPVAE
PRPEMPRTAG ARNGAHAAAP AQPPAPAPAP APAAPQEQGF FAWLKSLFGF GPRPAPAPVS
APVAAPAPAP AADAPRDGRR GGGRRGGRDG NGGGRDGQRE NGAAEGRGRR GERGERPERA
EGEAPRNGRG PRDAEGREGR PARERDRDRE GGRENGRDAS VRAEGDYAPR NGREGREGGR
GRERRESGDA PRQQPLGTDA GMGAVAPDVG IEGQGAAPQE RGERGPRNGE RRERRERGGD
RRPRGEEGQA EFVDTSPMAS LPDLDLTGGE AGSPATGSTP GEEPRRERRS RDRYGRDRRE
RAPREGAEVE TAPVTETTTA QAVQDVAGEG PAQEAPRRSY FSQGGGAPAP TAAAVASEAS
HGEAPAEPAQ APAGIPAAAP APAVAAAAVP VPVPVPVATP APAPAAAAAV PGLPRVQAFQ
LPVDELNRIA ESSGLQWVNS DAEKIAAAQA AIAAEPRPVH VPRERPPAVV LDEGPLVLVE
TRRDLRDLKL PFEQQPSSVA
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