Gene Aave_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1162 
Symbol 
ID4668727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1282197 
End bp1282892 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content73% 
IMG OID639822356 
Producthypothetical protein 
Protein accessionYP_969528 
Protein GI120609850 
COG category[S] Function unknown 
COG ID[COG4339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.437423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTC CCGATCGCCG CGCGCTCCTG AGCCGCTGGG ATGCGCTCGG GGCGGCCCTC 
TCGCGGCAGG GCCCGGCCTG GACGGCGGAG GGCCGCCGGC TGCTGCGCCA CTGGTCGTTC
TGGCCGCGGG CGTACCACGA CACGCACCAC CTGCAGGCCT GCCTCGACCA CTGGGACGCC
GCGCGCAATC CGGCCGGCCA CGGCCCGGGT GCGGAGACCG CCACCGAGGC GATGGACGAC
CCGCGTACCG TCGCCCTGGC GCTCTGGTTC CACGACGCCG TTTACTGGCC CTGGTCGGGC
CGCAACGAGG AGCGCAGCGC CCGCTGGGCA CGCCGCTTCC TGCAGGGCCA GGGCCTGCCT
GCCGACACCG TGAGCACCGT GGAACGCCAC ATCCTCGCGA CGTGCCACGG CCACGCGTCC
GCAGTGACGG GCGACGACCG CTGGGTGGTG GACATCGACC TCGCAATCCT CGGCCAGCCG
CCCGCGGTGT ATGCCGCTTT CGAGCGCAAC GTGCGGCGCG AATACCGCTT CGTGCGCTGG
CCCCGCTACC GCGCCGGCCG CTGCGCGATC CTGCGCTCGT TCCTGGAACG CCCTGCGCTC
TACGACACGG AATGGTTCCG AAGCCGTTAT GAAGCGCAGG CGCGGGCGAA CCTGGCGCAT
GCGCTGGACG TGCTGGGTGC CGGCGGCGCG TTCTGA
 
Protein sequence
MAAPDRRALL SRWDALGAAL SRQGPAWTAE GRRLLRHWSF WPRAYHDTHH LQACLDHWDA 
ARNPAGHGPG AETATEAMDD PRTVALALWF HDAVYWPWSG RNEERSARWA RRFLQGQGLP
ADTVSTVERH ILATCHGHAS AVTGDDRWVV DIDLAILGQP PAVYAAFERN VRREYRFVRW
PRYRAGRCAI LRSFLERPAL YDTEWFRSRY EAQARANLAH ALDVLGAGGA F