Gene Aave_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1153 
Symbol 
ID4668115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1271587 
End bp1274139 
Gene Length2553 bp 
Protein Length850 aa 
Translation table11 
GC content71% 
IMG OID639822347 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_969519 
Protein GI120609841 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG GATGGATCGA TTCCGGGACG GCCGGTGAAT GCTCCGCGGC GGCGGCATCC 
CTGGCATCGC AGGGCGGGCA ATGGGGGCAT GCGTGGGACG TCGTCCCGGT GTCCTGGTTC
TCCCTGCGCG AAGGGCCCGG CCCGGGCGCG GGCTTCGACG CCGTGGTGCT GGTGCCGCCG
CCGCATGCGG GCACGCTGCC GGCATGGTCC GTCCAGCCCG GCCGGCGCCT GCCGCTGCTG
CTCTACCTCG ACGCCCAGCC GCAGCAGGAG GCGCTGGCGG CCCGCGCGTT GCGTGCCGGG
CCCGGAGACT ATGTCCTGAG ATCGGGGCCG GGCGACGGCA CGATGCGCGA ACTGGCACTG
CGGCTGGCGG CCCTGCTGGC CTCCTGCGAA CGGAACAGCT TCGGCGGGAC GCGGCCTGGG
ATGGCACGGC AGGAAGGGGG CGGGGTCGCC AGCCCTCCCG GCCACGCCGC GACGCCTGAA
ATGCTGCGCA CGGCGCTCGA CCACATGGCC TCGGGCCTGC TCATCCTCGG GACGGATCGC
CGTGTGCGCT TCTACAACGA CCGCCTTCCC GAGATGCTCG ACCTGCCGCG CACCTTGCTC
GATGCCGCCC CCACCCTGGC GGAACTCAAG CAATGGCAGA CGCGGCGTGG CGACTTCGGG
CCCGGCTTCG AGCGGGTGGA CGAGCGGGGA CGGCCCTACG TGGAGAGTGG CGACGGCGTT
CCGCCCCCGG GCGTCTATTG GCGCAAGACA CCCGACGGGC GCATGCTCGA GGTTTTCACT
GCGCCCCTGC CGGGAGGGGA GTGGCTGCGC ACCTTTTCCG ACGTGACTCC GCACATGCTG
CTGCAGTCGG AACTGCGGCT CAGCGAGGCC CGGTTCCGCA GCCTGTGCGA CCTGTCCTCC
GACTGGTACT GGGAGCAGGA TGCCGAGCAC CGTTTCGTCC ACTTCAACCA GGGTCTCAAC
GGCCTGGGTA TCGCCGTGGA CGAGGCGGTC GGCCGCACAC GATGGGAACT GGGTGCGCCC
AATCTCTCGG CGGAAGACTG GGCGGAGCAC CGGCGCGTCC TGGCGGCCCG CCAGCCCTTC
CGGGACCTGG AGTTGCAGCG TACCGCGGCC GACGGCCGCG TGTCCTGGGT CTCCGTGAGC
GGGATCCCGG TCTTCAGCGC GGACGGCGCC TTCCTGGGTT ACCGGGGCGT CGGCCGGGAC
ATCACCGAGC GCAAGCGCGT GGACGCGGAA ATCGAGCGCC TGGCGTTCTT CGACCCGCTG
ACCGGGCTGC CCAACCGGCG CCTGCTCACC GACCGCCTGC GCCGCGCCAT CGGCACGGCG
GCGCGGGAGC GCAGCCATGG AGCACTGCTC TTCCTCGATC TGGACAATTT CAAGGACCTC
AACGACACGC TCGGGCACGA CATGGGCGAC CGCCTCCTCG TGCAGGCCGC GCAGCGCCTG
CTCGCCTGCG CTGGCGCGGG CGACACGGTC AGCCGGTTCG GCGGCGACGA GTTCGTGGTG
CTGGCGGAGG GCCTGCCGGG CGACATGCAC CGGGCCCGTG CCGATGCGGC CGTGCTGGCG
AACCGCATCA CCGCGGCACT GGGCAGGCCC TATGCGGTCG GGGGGATGGG ACACCACCAC
AGCACGCCCA GCATCGGGCT GGCGCTGTTC GGCGGCGGCA CGGGGGACGG GGCCGGCGTG
GACGACCTGC TCAAGCATGC CGACCTCGCC ATGTACCAGG CCAAGGCCGC CGGGCGCAAC
ACGATCCGCT TTTTCGATCC CTCGATGCTG CAGGCCGTCC TCGCGCGCGC GGCGCTCGAA
TCGGAATTGC GGCTCGCGCT CGAGTCGGAC GAACTCCTGC TGCACTACCA GCCGCTCGTG
AACGGCGACG GCAGCATGCT GGGCGCGGAA GCGCTGGTGC GCTGGCGCCA CCCGCAGCGC
GGCCTGGTGA TGCCCGGGGA ATTCATCCCC GCGGCGGAGC AGGGCGGACT GATCGTCGCG
CTGGGGCAAT GGGTCCTGGA ACGGGCCTGC GCGCAACTGG TGGCGTGGAG CCGGAGCGCC
GCCACGGCGC AGCTCGTGCT CGCGGTGAAC GTGAGCGTGC GCCAGTTCCG CCAGCCCGAT
TTCGTGGACC AGTTGCTGCA GACGCTGCGC CGCAGCGGGG CACAGCCGCG GCTGCTGAAG
ATCGAGCTCA CCGAGAGCCT GCTCATGGCG GACGTGGAAG ACGTGATCGC GCGCATGGAG
CAACTGCGGG CGCACGGGGT GGGTTTCGCC ATCGACGACT TCGGCACGGG CTACTCGTCG
CTCGCCTACC TCAAGCGGCT GCCGCTGGAC CAGCTCAAGA TCGACCAGAG CTTCGTGCGC
GACGTGCTGA CCGATCCCAA CGATGCCGCC ATCGTGCGGA CCATCCTGGC GCTGGCCCGC
AGCCTCGACC TGGAGGTGGT CGCCGAAGGG GTGGAAACCA CGGGCCAGCT GAAATTCCTG
CAGCGCCACG GCTGCAAGGC GTTCCAGGGC CACCTCTTCG GGCGGCCCGC GCCCGCCGCC
GTGCTGGAGA GGGCGTTGCG CCCCGCGCTG TGA
 
Protein sequence
MRIGWIDSGT AGECSAAAAS LASQGGQWGH AWDVVPVSWF SLREGPGPGA GFDAVVLVPP 
PHAGTLPAWS VQPGRRLPLL LYLDAQPQQE ALAARALRAG PGDYVLRSGP GDGTMRELAL
RLAALLASCE RNSFGGTRPG MARQEGGGVA SPPGHAATPE MLRTALDHMA SGLLILGTDR
RVRFYNDRLP EMLDLPRTLL DAAPTLAELK QWQTRRGDFG PGFERVDERG RPYVESGDGV
PPPGVYWRKT PDGRMLEVFT APLPGGEWLR TFSDVTPHML LQSELRLSEA RFRSLCDLSS
DWYWEQDAEH RFVHFNQGLN GLGIAVDEAV GRTRWELGAP NLSAEDWAEH RRVLAARQPF
RDLELQRTAA DGRVSWVSVS GIPVFSADGA FLGYRGVGRD ITERKRVDAE IERLAFFDPL
TGLPNRRLLT DRLRRAIGTA ARERSHGALL FLDLDNFKDL NDTLGHDMGD RLLVQAAQRL
LACAGAGDTV SRFGGDEFVV LAEGLPGDMH RARADAAVLA NRITAALGRP YAVGGMGHHH
STPSIGLALF GGGTGDGAGV DDLLKHADLA MYQAKAAGRN TIRFFDPSML QAVLARAALE
SELRLALESD ELLLHYQPLV NGDGSMLGAE ALVRWRHPQR GLVMPGEFIP AAEQGGLIVA
LGQWVLERAC AQLVAWSRSA ATAQLVLAVN VSVRQFRQPD FVDQLLQTLR RSGAQPRLLK
IELTESLLMA DVEDVIARME QLRAHGVGFA IDDFGTGYSS LAYLKRLPLD QLKIDQSFVR
DVLTDPNDAA IVRTILALAR SLDLEVVAEG VETTGQLKFL QRHGCKAFQG HLFGRPAPAA
VLERALRPAL