| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1153 |
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| Symbol | |
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| ID | 4668115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1271587 |
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| End bp | 1274139 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639822347 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_969519 |
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| Protein GI | 120609841 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATCG GATGGATCGA TTCCGGGACG GCCGGTGAAT GCTCCGCGGC GGCGGCATCC
CTGGCATCGC AGGGCGGGCA ATGGGGGCAT GCGTGGGACG TCGTCCCGGT GTCCTGGTTC
TCCCTGCGCG AAGGGCCCGG CCCGGGCGCG GGCTTCGACG CCGTGGTGCT GGTGCCGCCG
CCGCATGCGG GCACGCTGCC GGCATGGTCC GTCCAGCCCG GCCGGCGCCT GCCGCTGCTG
CTCTACCTCG ACGCCCAGCC GCAGCAGGAG GCGCTGGCGG CCCGCGCGTT GCGTGCCGGG
CCCGGAGACT ATGTCCTGAG ATCGGGGCCG GGCGACGGCA CGATGCGCGA ACTGGCACTG
CGGCTGGCGG CCCTGCTGGC CTCCTGCGAA CGGAACAGCT TCGGCGGGAC GCGGCCTGGG
ATGGCACGGC AGGAAGGGGG CGGGGTCGCC AGCCCTCCCG GCCACGCCGC GACGCCTGAA
ATGCTGCGCA CGGCGCTCGA CCACATGGCC TCGGGCCTGC TCATCCTCGG GACGGATCGC
CGTGTGCGCT TCTACAACGA CCGCCTTCCC GAGATGCTCG ACCTGCCGCG CACCTTGCTC
GATGCCGCCC CCACCCTGGC GGAACTCAAG CAATGGCAGA CGCGGCGTGG CGACTTCGGG
CCCGGCTTCG AGCGGGTGGA CGAGCGGGGA CGGCCCTACG TGGAGAGTGG CGACGGCGTT
CCGCCCCCGG GCGTCTATTG GCGCAAGACA CCCGACGGGC GCATGCTCGA GGTTTTCACT
GCGCCCCTGC CGGGAGGGGA GTGGCTGCGC ACCTTTTCCG ACGTGACTCC GCACATGCTG
CTGCAGTCGG AACTGCGGCT CAGCGAGGCC CGGTTCCGCA GCCTGTGCGA CCTGTCCTCC
GACTGGTACT GGGAGCAGGA TGCCGAGCAC CGTTTCGTCC ACTTCAACCA GGGTCTCAAC
GGCCTGGGTA TCGCCGTGGA CGAGGCGGTC GGCCGCACAC GATGGGAACT GGGTGCGCCC
AATCTCTCGG CGGAAGACTG GGCGGAGCAC CGGCGCGTCC TGGCGGCCCG CCAGCCCTTC
CGGGACCTGG AGTTGCAGCG TACCGCGGCC GACGGCCGCG TGTCCTGGGT CTCCGTGAGC
GGGATCCCGG TCTTCAGCGC GGACGGCGCC TTCCTGGGTT ACCGGGGCGT CGGCCGGGAC
ATCACCGAGC GCAAGCGCGT GGACGCGGAA ATCGAGCGCC TGGCGTTCTT CGACCCGCTG
ACCGGGCTGC CCAACCGGCG CCTGCTCACC GACCGCCTGC GCCGCGCCAT CGGCACGGCG
GCGCGGGAGC GCAGCCATGG AGCACTGCTC TTCCTCGATC TGGACAATTT CAAGGACCTC
AACGACACGC TCGGGCACGA CATGGGCGAC CGCCTCCTCG TGCAGGCCGC GCAGCGCCTG
CTCGCCTGCG CTGGCGCGGG CGACACGGTC AGCCGGTTCG GCGGCGACGA GTTCGTGGTG
CTGGCGGAGG GCCTGCCGGG CGACATGCAC CGGGCCCGTG CCGATGCGGC CGTGCTGGCG
AACCGCATCA CCGCGGCACT GGGCAGGCCC TATGCGGTCG GGGGGATGGG ACACCACCAC
AGCACGCCCA GCATCGGGCT GGCGCTGTTC GGCGGCGGCA CGGGGGACGG GGCCGGCGTG
GACGACCTGC TCAAGCATGC CGACCTCGCC ATGTACCAGG CCAAGGCCGC CGGGCGCAAC
ACGATCCGCT TTTTCGATCC CTCGATGCTG CAGGCCGTCC TCGCGCGCGC GGCGCTCGAA
TCGGAATTGC GGCTCGCGCT CGAGTCGGAC GAACTCCTGC TGCACTACCA GCCGCTCGTG
AACGGCGACG GCAGCATGCT GGGCGCGGAA GCGCTGGTGC GCTGGCGCCA CCCGCAGCGC
GGCCTGGTGA TGCCCGGGGA ATTCATCCCC GCGGCGGAGC AGGGCGGACT GATCGTCGCG
CTGGGGCAAT GGGTCCTGGA ACGGGCCTGC GCGCAACTGG TGGCGTGGAG CCGGAGCGCC
GCCACGGCGC AGCTCGTGCT CGCGGTGAAC GTGAGCGTGC GCCAGTTCCG CCAGCCCGAT
TTCGTGGACC AGTTGCTGCA GACGCTGCGC CGCAGCGGGG CACAGCCGCG GCTGCTGAAG
ATCGAGCTCA CCGAGAGCCT GCTCATGGCG GACGTGGAAG ACGTGATCGC GCGCATGGAG
CAACTGCGGG CGCACGGGGT GGGTTTCGCC ATCGACGACT TCGGCACGGG CTACTCGTCG
CTCGCCTACC TCAAGCGGCT GCCGCTGGAC CAGCTCAAGA TCGACCAGAG CTTCGTGCGC
GACGTGCTGA CCGATCCCAA CGATGCCGCC ATCGTGCGGA CCATCCTGGC GCTGGCCCGC
AGCCTCGACC TGGAGGTGGT CGCCGAAGGG GTGGAAACCA CGGGCCAGCT GAAATTCCTG
CAGCGCCACG GCTGCAAGGC GTTCCAGGGC CACCTCTTCG GGCGGCCCGC GCCCGCCGCC
GTGCTGGAGA GGGCGTTGCG CCCCGCGCTG TGA
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| Protein sequence | MRIGWIDSGT AGECSAAAAS LASQGGQWGH AWDVVPVSWF SLREGPGPGA GFDAVVLVPP
PHAGTLPAWS VQPGRRLPLL LYLDAQPQQE ALAARALRAG PGDYVLRSGP GDGTMRELAL
RLAALLASCE RNSFGGTRPG MARQEGGGVA SPPGHAATPE MLRTALDHMA SGLLILGTDR
RVRFYNDRLP EMLDLPRTLL DAAPTLAELK QWQTRRGDFG PGFERVDERG RPYVESGDGV
PPPGVYWRKT PDGRMLEVFT APLPGGEWLR TFSDVTPHML LQSELRLSEA RFRSLCDLSS
DWYWEQDAEH RFVHFNQGLN GLGIAVDEAV GRTRWELGAP NLSAEDWAEH RRVLAARQPF
RDLELQRTAA DGRVSWVSVS GIPVFSADGA FLGYRGVGRD ITERKRVDAE IERLAFFDPL
TGLPNRRLLT DRLRRAIGTA ARERSHGALL FLDLDNFKDL NDTLGHDMGD RLLVQAAQRL
LACAGAGDTV SRFGGDEFVV LAEGLPGDMH RARADAAVLA NRITAALGRP YAVGGMGHHH
STPSIGLALF GGGTGDGAGV DDLLKHADLA MYQAKAAGRN TIRFFDPSML QAVLARAALE
SELRLALESD ELLLHYQPLV NGDGSMLGAE ALVRWRHPQR GLVMPGEFIP AAEQGGLIVA
LGQWVLERAC AQLVAWSRSA ATAQLVLAVN VSVRQFRQPD FVDQLLQTLR RSGAQPRLLK
IELTESLLMA DVEDVIARME QLRAHGVGFA IDDFGTGYSS LAYLKRLPLD QLKIDQSFVR
DVLTDPNDAA IVRTILALAR SLDLEVVAEG VETTGQLKFL QRHGCKAFQG HLFGRPAPAA
VLERALRPAL
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