| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1152 |
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| Symbol | |
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| ID | 4666824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1268223 |
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| End bp | 1271585 |
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| Gene Length | 3363 bp |
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| Protein Length | 1120 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822346 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_969518 |
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| Protein GI | 120609840 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT TCCGCCCGCC GTCCTCCGGC TCCTTCCTTC GCGCCCTGTT CTCCGAAAGC
CCGGCGGCCA CTGCCGTGCT GTTGGTGGTC GGCATGGCGG CGATGTTCAT CCCCGTCATG
CAGTTGCTGG ACACGGGGCT GGGCGGCCCC TACGTCGTCG AGCAATTCCT GGACATGGTG
GCGGTGCTGA TCGGCGTGCT GGCCGTGTCG GTATCGCTGC ACATGCTGGA TGAAAGCGCC
CAGGGCCGCG CCAACATCCT GGTGGCGGGC TTGGCGACTG CCGCCGTCTG CAACTTCCTC
CATGGCGTCC TGCCGCACCA GCCGCTGGGG ACGGGCCAGG ACGCACAGGT GGCGGTTTCG
CGCTATTTCT CCCTCTGGGG GCATGGCGTG GAGTCGGTGA CGCTGCTGCT GTTCGCCCTG
CGTGCTTCGG CCGCGGGCCC GGGCATGGCC TGGGCCCTGG TGTCTGCCCT GGCGTCCCTG
GCCATCGCCT GGACGGCCAC GACGGACGTG CCGCGCGACT GGCTGGTGGC TGCGGGCCAT
GCCCCGCTAC GCATCGCCGC GCTGGTGTCC GGGACGCTCA TGGCCCTGTC CGCGTGCCTG
TTCTACGGCA TGCGCCAGCG CCGCACGGAC GCTTCGGTGA AACGCCATGG CCGGCGCCGC
ACCATGGCCG CCGCCGCCGT GTCGATGGCG GCGGCGCAGT TCCTCATGGC GGTTCCGCCG
GAGCGGTTCT ACTGGGCCCG CATGCTCGCG CACGCCCTGC ACGTGGCGGG CTATGCCCTC
TTGTTCCAGG CGGTCTTCAT CGCCGGCATA CGCATGCCCT ACGCCCGGCT GCGGGAGGCG
GAGTCCCGCC TGCGCGAAAG CGAGTCGCGC CTGCAGTTGC TCGGTCGCAA CCTGCCCGAC
AGCGTGCCCT ACCAGATGGT CCGCGAGCCC GACGGCCGCC GTCGGTTCGT CCACATGGGC
GAGGCGCTGG AGCGGCTCGT GGGGGTGAGC GCCGCCGACG TCATGGAGGA TGCGCAGCGC
CTGTTCGACC GCATCGATCC CGAAGACCGG GCGGCCCAGG CCGAGGCGGA TGAAGTCTCC
TACCGCACGA TGGGCGTGGG GGAGTCGGTG GTGCGCATGC GGCGCATGGA CGGCGCGCCG
CGGTGGATAC GGCTGAGTTC CTCGCCGCGG CTGCTGCAGG GGGGCAGCGG CCGCGTCATC
TGGGACGGCG TCCTCACCGA CGTGACGCAA CAGCGGGAGG CCCAGGACCT GAGCCGGGCG
CACGAAATCC AGCTCGCCAG CCTGCTGGGC CGCATGCCGG GGGGCATTTC CCGGCTCGAC
CGCGACCTGC GCATCCTCTA CGTCAATCCG TCGCAGGCCC AGTGGCTGCG CCGCACACCG
CAGGAGCTGG AGGGGCAGCG TGCTTCCGAC GTCCTGTCCG CGGAACTCTT GCAGTCCTTG
CATCCGCACA TGCTGCAGGC CCTGCAGGGG CGGCCGGTGG TGTTCGACTA CCGCTCGCCC
TACAGGGGGG CCGGGCCGGA GTTCTTCCAC ACCACCATCA TTCCGGAAAC CGGGCCGGAC
GGGCGCGTCG TGGCGATCAT GGTGTTCGCC GTCGATGTGA CGGAGCAGAA GCACCTGGCG
CTGGAGCTCA GCCAGCAGCG CTCGCGGCTC GCCAGCCTCG TCAACGCCAT TCCGGACGTG
GTGTTCCTCA AGGACGCTGC CGGGCGCTAC CTCTCCTGCA ACCCGGTGTT CGAGCGTTAC
CTGGGCCGGC GCGAGCGCGA CATCGTCGGA CTGGGCGACG AGGAACTGAT GACTCCCGTC
GAAGCCGCCC GCGTGCGCCA GCTCGACGAG CGGGCGATGG CCGCCTGGCA ACCCCTGGTG
TACGAGGAAA CGCTCACCTT CGCCGAGGAT GGCTATGCCG GCTACTTCGA AACCATCAAG
ACCCCGATCC GTGACATGCA CGGGCACGTC ACGGGATTGC TCAGCGTGAG CCGCGACATC
ACCGACCGCA AGAAGGCCGA GCAGCAGATC GAGCTGCTGG CCTTCTTCGA CGCCCTCACC
GGGCTGCCGA ACCGGCGCCT GCTGCTGGAC CGGCTGCAGC GGGCCGGCGC CGCCTGCCAG
CGCAACGAGA AGCTGGGTGC GCTGCTGTTC ATCGATCTGG ACAACTTCAA GGACCTCAAC
GATACGCTCG GGCACGACAT GGGCGACCGC CTGCTGGTGC AGGTGGCGCA GCGGCTGCAG
GAGTGCGTGC GCACCTCCGA TACCGTGGCC CGTTTCGGGG GCGACGAATT CGTGGTCATG
CTCGAAGGCC TGGACGCCGA CACCGCCCTC GCGGCGCTGC AGGCCGAGCA GGTCGCGGAG
AAACTGCTCG CGCAGCTCAA CCGGCCCTTC GAGATGGGCG CGCAGCAGCA CTACAGCACG
CCCAGCATCG GCATCACCCT CTTCGGCGAC CAGCGGCGTA CCGTGGACGA ACTGCTCAAG
CGCGCCGATC TCGCCATGTA CCAGGCCAAG GCCGCGGGCC GGAACACCCA GCGGTTCTTC
GATCCGGACA TGCAGGCCCA GGTGACAGCG CGTTCGCAGC TGGAGTCCGA CCTCCGCCAG
GGCATCGCGC GGCATGAACT CACCGTGCAC CTGCAGCCGA TCGTGGACGG CAGCACGCGC
CTGTGCGGCG CGGAAGCGCT CGTGCGCTGG CGGCACCCCG TGAAAGGCCT GATCAGCCCC
GCGGATTTCA TCCCGCTCGC CGAGGAGACC GGCCTCATCC TCCCGCTGGG CCGGCAGGTG
CTGCAGACCG CGTGCGAGCA ACTCGTGCGC TGGGCCACGC ACCCCGCCAC GGCGTCGTTC
ACCATCGCGG TGAACGTGAG CGCCCGCCAG TTCCGCCAGC CCGATTTCGT GGCGGAGGTG
CTGGGAACGC TCGCGGGCAC CGGGGCGAAC CCGCAGCGGC TCAAGCTCGA ACTCACCGAA
AGCCTGCTGC TGGGCGATGT GGAAGACACG ATCTGCCGCA TGGCGCAGCT CAAGCGGGTC
GGCGTGGGCT TCGCGCTGGA CGATTTCGGC ACCGGCTATT CGTCGCTGAG CTACCTCAAG
CGCCTTCCGC TCGACCTGGT GAAAATCGAC CAGAGCTTCG TGCGCGACGT GCTCACCGAC
CCCAATGACG CCGCCATCGT CCGCACCATT CTTGCGCTGG CCAAGAGCCT CGATCTGCAG
GTCGTGGCCG AAGGGGTGGA AACCGCCGGC CAGCTGAGTT TTCTCAAGCT GCACGGCTGC
GAGGGCTTCC AGGGCTATCT GTTCGGCAGG CCGGTGCCGC TGGAGGCTTT CGAGCGCGAG
CACGACCTTC CCGTTGCGGT GGAGCCCTCC AGGGTCCTGG GAACCGCCGG CGTGGCGGTC
TGA
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| Protein sequence | MRLFRPPSSG SFLRALFSES PAATAVLLVV GMAAMFIPVM QLLDTGLGGP YVVEQFLDMV
AVLIGVLAVS VSLHMLDESA QGRANILVAG LATAAVCNFL HGVLPHQPLG TGQDAQVAVS
RYFSLWGHGV ESVTLLLFAL RASAAGPGMA WALVSALASL AIAWTATTDV PRDWLVAAGH
APLRIAALVS GTLMALSACL FYGMRQRRTD ASVKRHGRRR TMAAAAVSMA AAQFLMAVPP
ERFYWARMLA HALHVAGYAL LFQAVFIAGI RMPYARLREA ESRLRESESR LQLLGRNLPD
SVPYQMVREP DGRRRFVHMG EALERLVGVS AADVMEDAQR LFDRIDPEDR AAQAEADEVS
YRTMGVGESV VRMRRMDGAP RWIRLSSSPR LLQGGSGRVI WDGVLTDVTQ QREAQDLSRA
HEIQLASLLG RMPGGISRLD RDLRILYVNP SQAQWLRRTP QELEGQRASD VLSAELLQSL
HPHMLQALQG RPVVFDYRSP YRGAGPEFFH TTIIPETGPD GRVVAIMVFA VDVTEQKHLA
LELSQQRSRL ASLVNAIPDV VFLKDAAGRY LSCNPVFERY LGRRERDIVG LGDEELMTPV
EAARVRQLDE RAMAAWQPLV YEETLTFAED GYAGYFETIK TPIRDMHGHV TGLLSVSRDI
TDRKKAEQQI ELLAFFDALT GLPNRRLLLD RLQRAGAACQ RNEKLGALLF IDLDNFKDLN
DTLGHDMGDR LLVQVAQRLQ ECVRTSDTVA RFGGDEFVVM LEGLDADTAL AALQAEQVAE
KLLAQLNRPF EMGAQQHYST PSIGITLFGD QRRTVDELLK RADLAMYQAK AAGRNTQRFF
DPDMQAQVTA RSQLESDLRQ GIARHELTVH LQPIVDGSTR LCGAEALVRW RHPVKGLISP
ADFIPLAEET GLILPLGRQV LQTACEQLVR WATHPATASF TIAVNVSARQ FRQPDFVAEV
LGTLAGTGAN PQRLKLELTE SLLLGDVEDT ICRMAQLKRV GVGFALDDFG TGYSSLSYLK
RLPLDLVKID QSFVRDVLTD PNDAAIVRTI LALAKSLDLQ VVAEGVETAG QLSFLKLHGC
EGFQGYLFGR PVPLEAFERE HDLPVAVEPS RVLGTAGVAV
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