| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1133 |
|---|
| Symbol | |
|---|
| ID | 4668782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1244785 |
|---|
| End bp | 1245864 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639822329 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_969501 |
|---|
| Protein GI | 120609823 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.458901 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGC TTGAACCGCG TCCGCAGGCC TCGCGCCTGT GGACCTATGG CTCGCCGCTG
CTCGCGCTGG CCTTCACCGT GCTGATCGGC GTCCTGCTGT TCGCCGCCCT GGGCAAGGAC
CCGGTGCGCG GCCTGCAGGT GTTCTTCTGG GAGCCGATCA AGACGCAGTA CGCGATCGGC
GAACTCATGG TCAAGGCCAC GCCGCTGCTG CTGATCGCGC TGGGGCTGGC CGTGTGCTTC
CGCTCCAACG TGTGGAACAT CGGCGCCGAG GGCCAGTTCG TGATCGGCGC CGTGGCCGCG
GGCGGCATCG CGCTGCTGGC GGACAAGACC ACCGGGCCGT GGATCGTGCC GGCCATCCTG
GTGGCCGGCG TGCTGGGCGG CATGTGCTGG GCCGGCATCA CCGCGCTGCT GCGCGACCGC
TTCAACGCCA ACGAGATCCT GGTGAGCCTG ATGCTGGTCT ACGTCGCCAC GCTGGTGCTG
GGCTACCTCG TCTACGGCCC CTGGAAGGAC CCGATGGGCT ACAACTTCCC GCAGACCCGC
ACCTTCGAGC GGGTGACGCA GATCCCGCGC CTGATGCAGG GCTCGCGCGT GACCATCGGC
CTGCCGATCG CGCTGGCCGC TGCGGCGGCG CTGTGGGTGT TCCTGTTCCG CACGCGGGCG
GGCTTCGCTC AGCAGGTGGG CGGGCTCGCC CCGGCCGCCG CGCGCTACGC CGGCTTCTCG
TCGCGCCGCG CGCTGTGGAC GGCGCTGCTC ATCTCCGGCG GCGCAGCTGG CCTCGCGGGC
GCGCTGGAAG TGGCCGGCCC CCTGGGCCAG CTCACGCCCT ACGTGCCGGC GGGCTACGGC
TTCGCGGCCA TCATCGTCGC CTTCGTGGGG CGGCTGCACC CGGTGGGCAT GGTGTTCTCC
GCGCTGCTCA TGAGCATGTT CTACATCGGC GGCGAGCTCG CGCAGTCGCG CCTCGGGCTG
CCGAAATCGC TCACGGGCGT GTTCCAGGGC CTGCTGCTGT TCACGCTGCT GGCCTGCGAC
ACGCTGATCG CCTACCGCGT GCGCTGGATC GGCGCGCCGG CCCGGAAAGG AGCCGCGTGA
|
|---|
| Protein sequence | MLKLEPRPQA SRLWTYGSPL LALAFTVLIG VLLFAALGKD PVRGLQVFFW EPIKTQYAIG
ELMVKATPLL LIALGLAVCF RSNVWNIGAE GQFVIGAVAA GGIALLADKT TGPWIVPAIL
VAGVLGGMCW AGITALLRDR FNANEILVSL MLVYVATLVL GYLVYGPWKD PMGYNFPQTR
TFERVTQIPR LMQGSRVTIG LPIALAAAAA LWVFLFRTRA GFAQQVGGLA PAAARYAGFS
SRRALWTALL ISGGAAGLAG ALEVAGPLGQ LTPYVPAGYG FAAIIVAFVG RLHPVGMVFS
ALLMSMFYIG GELAQSRLGL PKSLTGVFQG LLLFTLLACD TLIAYRVRWI GAPARKGAA
|
|---|
| |