Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1120 |
Symbol | |
ID | 4668514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1226658 |
End bp | 1228571 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639822317 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_969489 |
Protein GI | 120609811 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTAA CAACCGCTCC CGTCAATGAC AGCACGCTGC AGGCGGTGCT GGATTCTCTG TCGTCCGCGG TGCGCGACGG CACGGGCCCG CTCGTACAGC TCATGCGTGA AGGCGGGCTC CACTGTGTCT TCCAGCCCCT GGCCGATCTG CGCGAGGGCA ACGTCTATGC CCACGAGGCC CTGATCCGCG GCCCGGCGGG CACGCCGCTG CACACGCCCG ACCGGCTGCT GCAGACCGCG CTCGGGGAAG GCGTTCTGCA GGAGTTCGAG CTGCTGTGCG TGGCGATCGC CCTGCGCCAG TGGGGGGCGT CCGGCGGCGC AGGCCGCCTG TTCGTGAACA TCAGCGCGGA TGCCCTGGTG CGCGGGGTGG CGCTGTGCCG CGGCATGACC CTGGCGGGCG CCGCCCGCGC CGCGGGCGTG TCGGCGGAGA ACGTGGTGCT GGAGATCACC GAGCACGAGC GCGTGGGCGA CATGGCCTCG CTGCGCGAGG CGCTCAAGCA GGTGCACGCC TGCGGCGCCC GCATCGCGCT CGACGATTTC GGGGACGGCC GCTCCAGCCT GCGGCTCTGG TCCGAGACGC GGCCGGACTT CGTGAAGATC GACAAGTACT TCGTGCGCGA CATCAGCGCC CACCCCGGGA ACCTGCAGAT GCTGCAGGCC ATCAAGGGCA TCGCCGACGT GTTCGGCACG ACCCTGATCG CCGAGGGCAT CGAGACCCAG GACGACCTGC GGGCGCTGCG CGACCTCGAC ATTCCCTACG GCCAGGGCTA CCTGCTGGGC CGGCCGGGGT CCGGGCCTCG CGGGCGGATC GAAGTGCCCG CCCTGGACGC CGTGCGCGAC CGCCGCGTGG CGATCCTGCC GCACCGCGGC CAGAACGCGC GGCCGGGCAT CCTGCGCAAC CTGCTGGTGG TGCACGCGCC CACGGCCACG GCCGAGACCA GCAACGACAC GGTGGCCGGC TTCTTCAAGG CGCATCCCGA ACTGCACGCC CTGCCGGTGC TCGACGGCAC CCGGCCGGTG GCGCTGATCA ACCGCCAGCA ATTCATGAAC CACTACGCGA CGCTGTACTT CCGCGAGGTG CACGGGCGCA AGGCCTGCGC GGCCTTCGCG AACCCGGCCC CGCGCGTGGT GGAACTCGAC TGCGACGTGG ACCAGCTCGT GGGCATCCTG ACCTCGCAGG ACCAGCGCTA CCTGAGCGAC GGATTCATCG TCACCGACAA CGGCCGCTAC GTGGGTCTGG GCACGGGCGA ACAATTGGTG CGCAGCGTGA CCGAGGCCCG CATCGAGGCG GCGCGGCACG CCAACCCCCT CACCTTCCTG CCGGGCAACA TTCCCATCAG CCTGCACATG CAGCGGCTGA TCGACAGCGG CACGGAGTTC GTGGCCTGCT ATGCCGACCT GAACCACTTC AAGCCCTTCA ACGACTACTA CGGCTACTGG CGCGGCGACC AGATGATCCG CCTCGTGGCG CGGCTGGCCG TGGCGCACTG CGATGCGCAG CGGGACTTCA TCGGGCACGT GGGCGGGGAC GACTTCATGC TGCTGTTCCA GAGCGGCGAC TGGCTGCAGC GCTGCCAGCG CATCGTGCAG GACTTCGCGC GCGAGGCCTT CAATCTGTTC GACGACGCCG CGCGCGCGGC CGGCGGCATC TGGGCGGAAG ACCGGCACGG GGTGAAACGC TTTTTCCCCT GCACGACGCT GGCGATCGGC GCGGCGCGCG TGGTGCCGGG CACGATGCGC CACGCCGAGG AGGTGGCCAA TGCCGCCGCG CTGGCCAAGC ACGAAGCCAA GGGCTGCGCG AGCGGCCTGG CCTGGCGCAC GGCAGAGCAG GCCGCCCATC TGGCGCACGC TTTCGGGCAG GCACCGCCGC GCGCCCGGCA GGGCTCCGCC GCCACGGCCG CAGCATCCGC CTGA
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Protein sequence | MAVTTAPVND STLQAVLDSL SSAVRDGTGP LVQLMREGGL HCVFQPLADL REGNVYAHEA LIRGPAGTPL HTPDRLLQTA LGEGVLQEFE LLCVAIALRQ WGASGGAGRL FVNISADALV RGVALCRGMT LAGAARAAGV SAENVVLEIT EHERVGDMAS LREALKQVHA CGARIALDDF GDGRSSLRLW SETRPDFVKI DKYFVRDISA HPGNLQMLQA IKGIADVFGT TLIAEGIETQ DDLRALRDLD IPYGQGYLLG RPGSGPRGRI EVPALDAVRD RRVAILPHRG QNARPGILRN LLVVHAPTAT AETSNDTVAG FFKAHPELHA LPVLDGTRPV ALINRQQFMN HYATLYFREV HGRKACAAFA NPAPRVVELD CDVDQLVGIL TSQDQRYLSD GFIVTDNGRY VGLGTGEQLV RSVTEARIEA ARHANPLTFL PGNIPISLHM QRLIDSGTEF VACYADLNHF KPFNDYYGYW RGDQMIRLVA RLAVAHCDAQ RDFIGHVGGD DFMLLFQSGD WLQRCQRIVQ DFAREAFNLF DDAARAAGGI WAEDRHGVKR FFPCTTLAIG AARVVPGTMR HAEEVANAAA LAKHEAKGCA SGLAWRTAEQ AAHLAHAFGQ APPRARQGSA ATAAASA
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