Gene Aave_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1119 
Symbol 
ID4668126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1225407 
End bp1226624 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID639822316 
Producthypothetical protein 
Protein accessionYP_969488 
Protein GI120609810 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.697257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCT ATCTCCTCGA CTGGGCCAAC CTGCTGCTGC GCTGGGTCCA CGTCATCACC 
GCCATCGCCT GGGTCGGTTC GTCGTTCTAC TTCGTCTTCC TCGATTCCAG CCTCACCCCG
CCGGTCGATG AGGACCTGAA GCGCCAGGGC GTGAGCGGCG AACTCTGGGC GGTGCACGGC
GGCGGCTTCT ACCACCCGGT GAAGTTCGCG GGCGCGCCGC CGCAACTGCC GAAGCACCTG
CACTGGTTCT TCTGGGAGAG CTACAGCACC TGGATCAGCG GCTTCGCGCT GTTCACCGTG
TCCTACCTCT GGAGCGCCAG CACCTACCTC ATCGACAAGT CGCGCATGGA CTGGGCGCCG
GCCACCGCCG TCGTGGTCGC GCTGGCGTTC CTGGCCGTGT TCTGGCTGCT GTACGACGCG
ATCTGCCGCG TTTTCGGCCA GCGGAATAAC GGCGACGCCA TCGTCGGAGC GCTGGTCTTC
GTGCTGGTGT GCGCGGCCTC GTGGCTGGCC TGCCACTGGT TCGCGGGCCG GGCGGCCTTC
CTGCTGGTGG GCGCGATGAT CGCCACCAGC ATGAGCGCCA ACGTGTTCTT CTGGATCATT
CCGGGCCAGC GCAAGGTGAT CGCGCAGATG AAGGCCGGCC AGCCGGTGGA CCCGATCCAC
GGCAAGCGCG GCAAGCAGCG CAGCGTGCAC AACACCTACT TCACGCTGCC GGTGCTGTTC
TGCATGCTGT CCAACCACTA CAGCTTCACC TGGAGCCATC CGCAGAACTG GCTCATCCTC
ATCCTGATGA TGTTCGCGGG CGCCTCCATC CGCCAGTTCT TCGTGATGCG CCACGGCTGG
AAGCTGGGCC GCAACGCGCA CCCGCTGCCT TACGCGCTGG TGGGCTGCGC CGTCATCGTC
GGCACCATCG CCGGGCTGCG GCTGTCGCAG GCGCCCGCCG CGCCGGCGGC GCAATCGTCG
GCTGCCGGCG CCGAGCCCGT GGGCTACGCC CTGCTGCAGC CGGTGCTGGC GCAGCGCTGC
TACATGTGCC ATGGCGAGCA GGTGCAGATG AAGAACCTGC GCCTGGATTC CGCCGAATCC
GTGGCGCAGC ATGCCCAGGC CATCTACCAG CAGGCGGTGG TGCAGAAGCT GATGCCGATG
AACAACGCCA CCGGCATGAC GGATGCCGAG CGGGATCTCG TGCGGCGCTG GTTCGAGGGC
GGCGCGCCGG CCCGCTGA
 
Protein sequence
MESYLLDWAN LLLRWVHVIT AIAWVGSSFY FVFLDSSLTP PVDEDLKRQG VSGELWAVHG 
GGFYHPVKFA GAPPQLPKHL HWFFWESYST WISGFALFTV SYLWSASTYL IDKSRMDWAP
ATAVVVALAF LAVFWLLYDA ICRVFGQRNN GDAIVGALVF VLVCAASWLA CHWFAGRAAF
LLVGAMIATS MSANVFFWII PGQRKVIAQM KAGQPVDPIH GKRGKQRSVH NTYFTLPVLF
CMLSNHYSFT WSHPQNWLIL ILMMFAGASI RQFFVMRHGW KLGRNAHPLP YALVGCAVIV
GTIAGLRLSQ APAAPAAQSS AAGAEPVGYA LLQPVLAQRC YMCHGEQVQM KNLRLDSAES
VAQHAQAIYQ QAVVQKLMPM NNATGMTDAE RDLVRRWFEG GAPAR