| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1116 |
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| Symbol | |
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| ID | 4668172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1223308 |
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| End bp | 1223658 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822313 |
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| Product | transthyretin |
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| Protein accession | YP_969485 |
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| Protein GI | 120609807 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2351] Transthyretin-like protein |
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| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.61812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCTCA GTACGCACGT TCTCGACACC ATGCATGGCT GCCCGGCCGC GGGCATGGCG
GTTTCGCTCT ACGACACCGC AGGCGGCCAG GCCCGGCTGC TCAAGGAACT GGTGCTCAAC
CAGGACGGTC GCACCGATGC GCCGCTCTTC GACAACGCCA GCCTGCGTCC CGGCACCTAC
CGGCTGTCGT TCGAGGTGGG CGATTACTTT CGCGCGCGCG GCGTGGTGCT GCCCGAGCCG
AACTTCCTCG ACCGCGTGAG CCTGGACTTC GGCGTCGCCC ATGCCGACCA GCACTACCAC
GTGCCGCTGC TGGTCAGCCC CTGGAGCTAC TCGACCTACC GTGGCTCCTG A
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| Protein sequence | MGLSTHVLDT MHGCPAAGMA VSLYDTAGGQ ARLLKELVLN QDGRTDAPLF DNASLRPGTY
RLSFEVGDYF RARGVVLPEP NFLDRVSLDF GVAHADQHYH VPLLVSPWSY STYRGS
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