Gene Aave_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1101 
Symbol 
ID4666909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1207700 
End bp1208977 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content67% 
IMG OID639822299 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_969471 
Protein GI120609793 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.125687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCC TTTTCCGCAC CCTGTTCGGC CGTGTCGTGC TGGCCCTCGT GGCCGGCGTC 
GCCGTGGGGC TTCTGTGGCC CCAGTGGGCC GTGCAGCTCA AACCCCTGGG CGACGGCTTC
ATCAAGCTCA TCAAGATGCT GATCCCGCTG GTGGTGTTCT GCGTCGTGGT GCACGGCATC
GCCGGCACGG GGGACCTGAA GCGCGTGGGC CGCGTGGGCG TCAAGGCGCT GATCTACTTC
GAGGTGGTCA CCACCATCGC GCTGGCGCTG GGCCTCGTTC TCGCCTTCGT GTTCGAGCCC
GGCGTGGGCA TGAACGTGGA CCCGCGCGGG CTGGACGCCT CGGCGCTGAG TGCCTACACG
GACAACGCCA GCAAGCTTTC GGGCGGCGGC TTCAGCGATT TCGCGCTCAA GCTCATTCCC
GCCACGGCGG TGAGCGCCTT CTCCAGCGGC GACGTGCTGC AGGTGCTGTT GTTCTCGATC
ATCTTCGGCT GCGCGCTGGC GCTGGTGGGC GAACGTGGCG CACGCGTGGC CGGGCTCATC
GAGGATTTCT CGGTGGTGCT GTTCCGCGCC ATGGGCCTCA TCATCCAGCT CGCGCCGCTC
GGCGTGCTGG GCGCCATCGC CTTCACCGTG GGCAAGTACG GCATCGGCTC GCTCAAGCAG
CTCGGCATGC TGGTGGGGCT GTTCTACATC GCCGTGGCGC TGTTCGTGGT GGTCGTGCTC
GGGCTCATCA TGCGCGTCTC GGGCTTCAGC CTGTTCAAGC TGCTGCGCTA CCTGCGCGAA
GAGCTGGCCG TGGTGTTCGC CACCACCTCG TCCGACAGCG TGCTGCCGCA GATCATGGCC
AAGCTCAAGC ACATGGGCGT GCGCGACTCC ACCGTGGGCC TGGTGATCCC CACCGGCTAC
TCGTTCAACC TGGACGCGTT CTCCATCTAC ATCACGCTCG CGGCCGTGTT CATCGCCCAG
GCGACCAACA CGCCGATCAG CATGGCCGAC CTGCTGACCA TCCTCGCGAT CTCGCTCGTC
ACCTCCAAGG GCGCGCACGG CGTGCCGGGC TCGGCCATCG TGGTGCTGGC CGCCACGCTG
CACGCGATCC CGGCCATTCC GGCCATCGGC CTGGTACTGG TGCTCTCGGT GGACTGGTTC
ATGGGCATCG CCCGCGCGCT GGGCAATCTC GTGGGCAATT GCGTAGCCAC CGTGGCGATT
GCCGCGTGGG AAGGCGATAT CGACCGGGAG CGCGCCCGGG CCGTGCTCGA CGGCCAGGAT
GTGCCTCCCG TGGCCTGA
 
Protein sequence
MHFLFRTLFG RVVLALVAGV AVGLLWPQWA VQLKPLGDGF IKLIKMLIPL VVFCVVVHGI 
AGTGDLKRVG RVGVKALIYF EVVTTIALAL GLVLAFVFEP GVGMNVDPRG LDASALSAYT
DNASKLSGGG FSDFALKLIP ATAVSAFSSG DVLQVLLFSI IFGCALALVG ERGARVAGLI
EDFSVVLFRA MGLIIQLAPL GVLGAIAFTV GKYGIGSLKQ LGMLVGLFYI AVALFVVVVL
GLIMRVSGFS LFKLLRYLRE ELAVVFATTS SDSVLPQIMA KLKHMGVRDS TVGLVIPTGY
SFNLDAFSIY ITLAAVFIAQ ATNTPISMAD LLTILAISLV TSKGAHGVPG SAIVVLAATL
HAIPAIPAIG LVLVLSVDWF MGIARALGNL VGNCVATVAI AAWEGDIDRE RARAVLDGQD
VPPVA