Gene Aave_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1092 
Symbol 
ID4666078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1196376 
End bp1197200 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content68% 
IMG OID639822290 
ProductABC transporter-related protein 
Protein accessionYP_969462 
Protein GI120609784 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.44747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCA CCGAAACCTT TTTCGTGGAC TTCCGCGACG TCTGGCTCGC CTACAACGAA 
GAGCTGCTGC GCGCCAACCA TTTCGCGGTG GAAGCCATCG ACCTGCAGGT GCGGCGCGGC
GAGTTCATCG CCATCGTCGG CCCGTCGGGC TGCGGCAAGT CCACCTTCAT GAAGCTGGCC
ACGGGCCTGC GCATGCCCTC CATGGGCAAG ATCCGCATCG CCGGCGAGCC GGTGACCGGT
CCGCTCAAGA TCTCGGGCAT GGCCTTCCAG GCGCCTTCGC TGCTGCCCTG GCGCACCACG
GTCGCCAACG TGCTGCTGCC GCTGGAGATC GTCGAGCCGC ACCGCTCGCA GTTCAAGGCC
CGCCGCAGGG AGTACGAGGC GCGCGCCCGT GCCCTGCTCC AGAAGGTGGG CCTGGCCGGC
TACGAAGACA AATACCCCTG GCAGCTCTCG GGCGGCATGC AGCAGCGCGC CAGCATCTGC
CGCGCGCTCA TCCACGAGCC GCAGATGCTG CTGCTCGACG AACCCTTCGG CGCGCTCGAC
GCGTTCACGC GCGAGGAGCT CTGGTGCATC CTGCGCGACC TGCAGGCCGA GCAGAAATTC
AACGTCATCC TCGTCACGCA CGACCTGCGC GAGAGCGTGT TCCTGGCCGA CACGGTCTAT
GTGATGAGCA AGAGCCCGGG CCGCTTCGTG GTCCGCCGCG AGATCGACCT GCCGCGCCCG
CGCGACCTGG AGCTCACCTA CACCAAGGAA TTCACCGACA TCGTGCTGGA GCTGCGCGGC
CACATCGGGG CGCTGCGCAA GGCCGGCGGG GAGATCACGC AATGA
 
Protein sequence
MQATETFFVD FRDVWLAYNE ELLRANHFAV EAIDLQVRRG EFIAIVGPSG CGKSTFMKLA 
TGLRMPSMGK IRIAGEPVTG PLKISGMAFQ APSLLPWRTT VANVLLPLEI VEPHRSQFKA
RRREYEARAR ALLQKVGLAG YEDKYPWQLS GGMQQRASIC RALIHEPQML LLDEPFGALD
AFTREELWCI LRDLQAEQKF NVILVTHDLR ESVFLADTVY VMSKSPGRFV VRREIDLPRP
RDLELTYTKE FTDIVLELRG HIGALRKAGG EITQ