Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1092 |
Symbol | |
ID | 4666078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1196376 |
End bp | 1197200 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822290 |
Product | ABC transporter-related protein |
Protein accession | YP_969462 |
Protein GI | 120609784 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.44747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCCA CCGAAACCTT TTTCGTGGAC TTCCGCGACG TCTGGCTCGC CTACAACGAA GAGCTGCTGC GCGCCAACCA TTTCGCGGTG GAAGCCATCG ACCTGCAGGT GCGGCGCGGC GAGTTCATCG CCATCGTCGG CCCGTCGGGC TGCGGCAAGT CCACCTTCAT GAAGCTGGCC ACGGGCCTGC GCATGCCCTC CATGGGCAAG ATCCGCATCG CCGGCGAGCC GGTGACCGGT CCGCTCAAGA TCTCGGGCAT GGCCTTCCAG GCGCCTTCGC TGCTGCCCTG GCGCACCACG GTCGCCAACG TGCTGCTGCC GCTGGAGATC GTCGAGCCGC ACCGCTCGCA GTTCAAGGCC CGCCGCAGGG AGTACGAGGC GCGCGCCCGT GCCCTGCTCC AGAAGGTGGG CCTGGCCGGC TACGAAGACA AATACCCCTG GCAGCTCTCG GGCGGCATGC AGCAGCGCGC CAGCATCTGC CGCGCGCTCA TCCACGAGCC GCAGATGCTG CTGCTCGACG AACCCTTCGG CGCGCTCGAC GCGTTCACGC GCGAGGAGCT CTGGTGCATC CTGCGCGACC TGCAGGCCGA GCAGAAATTC AACGTCATCC TCGTCACGCA CGACCTGCGC GAGAGCGTGT TCCTGGCCGA CACGGTCTAT GTGATGAGCA AGAGCCCGGG CCGCTTCGTG GTCCGCCGCG AGATCGACCT GCCGCGCCCG CGCGACCTGG AGCTCACCTA CACCAAGGAA TTCACCGACA TCGTGCTGGA GCTGCGCGGC CACATCGGGG CGCTGCGCAA GGCCGGCGGG GAGATCACGC AATGA
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Protein sequence | MQATETFFVD FRDVWLAYNE ELLRANHFAV EAIDLQVRRG EFIAIVGPSG CGKSTFMKLA TGLRMPSMGK IRIAGEPVTG PLKISGMAFQ APSLLPWRTT VANVLLPLEI VEPHRSQFKA RRREYEARAR ALLQKVGLAG YEDKYPWQLS GGMQQRASIC RALIHEPQML LLDEPFGALD AFTREELWCI LRDLQAEQKF NVILVTHDLR ESVFLADTVY VMSKSPGRFV VRREIDLPRP RDLELTYTKE FTDIVLELRG HIGALRKAGG EITQ
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