| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1080 |
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| Symbol | |
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| ID | 4666227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1183246 |
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| End bp | 1184076 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639822278 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_969450 |
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| Protein GI | 120609772 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGG GTATCACGGG CAAATGGGCA CTGGTCTGCG GAGCGAGCAA GGGCCTGGGC
TATGGCTGCG CCGAGGCGCT GGTGCGCGAG GGCGTGAACG TGGTCATCAA TGCGCGCAAT
CCCGAGGACC TGCGCCTGGC GGCCGCGCGG CTGGCTTCGG CGGGCGCGGA GATCACGGCG
GCCGCCGGCC AGAAGGGGCC ACCGCCGCAG GTGGTGGCCG TGGCCGCCGA CATCACCACG
CCGGAGGGGC GCGAGGCAGC GTTCGCCGCG CCGGGCGGGC CGGGGCGCGA TTTCGACATC
GTGGTGACGA ACGCGGGCGG CCCGCCGCCC GGCGATTTCC GCGAGTGGGA CCGCGAGGCC
TGGATCCGCG CGGTGGATGC CAACATGCTC ACGCCGATCG AGCTGATCAA GGCGACGGTG
GACGGCATGG CGGCGCGCGG CTTCGGCCGC ATCGTGAACA TCACGTCGAG CGCGGTGAAG
GCGCCGATCG ACATCCTGGG CCTGTCCAAC GGCGCGCGCA GCGGCCTCAC GGGGTTCGTG
GCGGGCGCCG CGCGCAGCGG CATCGCCGCC AAGGGCGTGA CCATCAACAA CCTGCTGCCC
GGCAAGTTCG ACACCGACCG GCTGGCGGCC ACCATCCAGG CGGCCGTGAA GAAGTCGGGC
AAGAGCGAGG ACGATGTGCG CCGGGCCCAG CAGGCGGCCA TTCCGGCGGG CCGCTACGGC
ACGCCGCAGG AGTTCGGCGC GATCTGCGCC TTCCTCTGCA GCGTGCAGGC GGCCTACCTG
ACCGGGCAGA ACGTGCTGGC CGACGGCGGC GCCTATCCCG GGGCGTTCTG A
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| Protein sequence | MDLGITGKWA LVCGASKGLG YGCAEALVRE GVNVVINARN PEDLRLAAAR LASAGAEITA
AAGQKGPPPQ VVAVAADITT PEGREAAFAA PGGPGRDFDI VVTNAGGPPP GDFREWDREA
WIRAVDANML TPIELIKATV DGMAARGFGR IVNITSSAVK APIDILGLSN GARSGLTGFV
AGAARSGIAA KGVTINNLLP GKFDTDRLAA TIQAAVKKSG KSEDDVRRAQ QAAIPAGRYG
TPQEFGAICA FLCSVQAAYL TGQNVLADGG AYPGAF
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