| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1068 |
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| Symbol | |
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| ID | 4669075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1170904 |
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| End bp | 1172745 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639822267 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_969439 |
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| Protein GI | 120609761 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCA GCCTGCCTCC TACCCTCCAT GACGCCGCCG GGCCCGCGGC GCCGGCCGGC
TTCGCGGGCC CCCTCGAGTG GCGGCGCATC GTCGAGTGGC TGCGCGCCGA CGGCGTGATC
TCGCAGGAGG AGGCCGCGCG CACCATCGCG CGCTGCTCGC AGGCCGAGAG CCGGCAGCAT
CCGCTGGTGC GGCTGGCCAG CGTGGCGATG GCGCGCGCGA GCGACGGCAG GCCGCTGGAC
CTGGAGAGCC TGACCGAATA CCTGGCCGGC CGCAGCGGCC TGGCCTACCT GCGCATCGAT
CCGCTCAAGG TGGACGTGGG CCGCGTGGCC GACATGATGA GCGCGAGCTA CGCGGAGCGG
CACCGGGTGC TGCCCGTGCA GGTCACGCCG CGCGAGATCG TGGTGGCCAC GGCCGAGCCG
TTCGTGGACG ACTGGGTGGC CGAGGTGGAA CGCCAGTCGC GCCGCGCCGT GCGCCGCGTG
GTCGCCAACC CGCAGGACAT CCACCGCTAC ACGGCGGAGT TCTTCGCGCT GGCCAAATCG
GTGAAGGCGG CGCAGAAAGC CGGCGGCGCG AGCGCGGGCA GCAGCTTCGA GCAGCTGGTG
GAGCTGGGCC GCAGCAACAA GCAGCTGGAC GCGAACGACC AGGGCGTGGT CAAGGTGGTG
GACTGGCTCT GGCAGTACGC CTTCGACCAG CGCGCGAGCG ACATCCACCT GGAGCCGCGG
CGCGAGCAGG GCGTGATCCG CTTCCGGATC GACGGGGTGC TGCATCCGGT CTACCAGATG
CCCATGGGCG TGCTGAACGC CATGGTGTCG CGCGTGAAGC TGCTGGGCCG CATGGACGTG
GTCGAGAAGC GCCGCCCGCA GGACGGCCGC ATCAAGACCC GCAACCCGCG CGGCGACGAG
GTGGAAATGC GCCTCTCGAC CCTGCCCACG GCCTTCGGCG AGAAGATGGT GATGCGGATA
TTCGACCCGG ACAACACCGT CAAGGACCTG GACGCGCTGG GCTTCTCTCC GCACGACGCG
CAGCGCTGGG AAGCGCTGGT GCAGCGTCCG CACGGCATCA TCCTGGTCAC CGGGCCCACG
GGCTCGGGCA AGACCACCAC GCTCTACTCC ACGCTCAAGC GCCTGGCCAC CGAAGAGGTG
AACGTGAGCA CGGTGGAGGA CCCGATCGAG ATGATCGAGC CGAGCTTCAA CCAGACGCAG
GTGCAGCCGC AACTCGATTT CAGCTTCGCG GAAGGCCTGC GCGCGCTCAT GCGGCAGGAC
CCGGACATCC TGATGGTGGG CGAGATCCGC GACCTGGAGA CGGCGGACAT GGCCGTGCAG
GCCGCGCTCA CGGGCCACCT GGTGTTCTCC ACGCTGCACA CCAACGACGC CCCCTCGGCC
ATCAGCCGGC TGATGGAACT GGGCGTGCCG CCCTATCTCA TCAACGCCAC GCTGCTGGGC
GTGCTCGCGC AGCGGCTGGT GCGCACGCTC TGCCGGCAGT GCCGCCAGCG CGACGAGGCG
GCCGGCATCG AACGCCTGGC CGAGGTGGTG CGGCCCTGGA AGATCACCGG CGGCTACCAC
CCCTACCGGC CGGTGGGCTG CGTGGAATGC CGCATGACGG GCTTCCACGG CCGCATGGGG
CTCTACGAGC TGCTCACCGT GAGCGAGGCT CTGAAGGAGC GCATCACCCA GTCGCCCTCC
ATCGATGCGC TGCGGCGCCA GGCGCTGCAG GACGGCATGC GCCCGCTGCG GCTGGCCGGC
GCGCTGCGCG TGGCCGAAGG CGTGACCACC CTGGAGGAGG TCATCGCCGC AACGCCGCCG
CTGGAGTCAC GTGACCGGGC GGGCCCGCCG TCCGCGTCCT GA
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| Protein sequence | MSRSLPPTLH DAAGPAAPAG FAGPLEWRRI VEWLRADGVI SQEEAARTIA RCSQAESRQH
PLVRLASVAM ARASDGRPLD LESLTEYLAG RSGLAYLRID PLKVDVGRVA DMMSASYAER
HRVLPVQVTP REIVVATAEP FVDDWVAEVE RQSRRAVRRV VANPQDIHRY TAEFFALAKS
VKAAQKAGGA SAGSSFEQLV ELGRSNKQLD ANDQGVVKVV DWLWQYAFDQ RASDIHLEPR
REQGVIRFRI DGVLHPVYQM PMGVLNAMVS RVKLLGRMDV VEKRRPQDGR IKTRNPRGDE
VEMRLSTLPT AFGEKMVMRI FDPDNTVKDL DALGFSPHDA QRWEALVQRP HGIILVTGPT
GSGKTTTLYS TLKRLATEEV NVSTVEDPIE MIEPSFNQTQ VQPQLDFSFA EGLRALMRQD
PDILMVGEIR DLETADMAVQ AALTGHLVFS TLHTNDAPSA ISRLMELGVP PYLINATLLG
VLAQRLVRTL CRQCRQRDEA AGIERLAEVV RPWKITGGYH PYRPVGCVEC RMTGFHGRMG
LYELLTVSEA LKERITQSPS IDALRRQALQ DGMRPLRLAG ALRVAEGVTT LEEVIAATPP
LESRDRAGPP SAS
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