| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1057 |
|---|
| Symbol | |
|---|
| ID | 4669502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 1158597 |
|---|
| End bp | 1159961 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639822256 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_969428 |
|---|
| Protein GI | 120609750 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCGC TTTCGCCCTC GGCATCTCCT CCCACGGCCA CGGCCGCGCA AAGTGGCGAC
AATGTGGGCC TTTGCCGCCC CACCTGTCAC CATGAAGCGC TTCTGGCTGC TGTTTTCCCA
GGCCGTGACC GTGTTCGTCG CCGCCTACTT CGTCGTCGCC ACCCTGCAAC CGGACTGGAT
CCGGCGCGGC GCCACGCGCA GCAGCGCCGG CATCTCGCTC ATCGAGGCCC CGCCCGCCCC
CTCCTCCCAG CCCGTGGCGG GCAGCTTCAG CGCGGCGGTG CGCAAGGCGG CGCCGGCCGT
CGTCAGCATC AACACCAGCA AGGCCGTGCG CAATCCGCGC AGCAACGACC CGTGGTTCCA
GTTCTTCTTC GGCGACCAGG GCGCGCAGCA GACGCAGACC GGCCTGGGCA GCGGCGTGAT
CGTCAGCCCC GACGGCTACA TCCTCACCAA CAACCACGTC GTGGAAGGCG CGGACGAGAT
CGAGGTCACC CTGGCCGACA GCCGCCGCAC CCGCGCCACC GTGATCGGCA CCGACCCGGA
CACCGACCTC GCCATCCTGA AGGTGGACCT CGACAAGCTG CCCGCCATGG TGCTGGGCAA
CTCCGACCAG CTCTCCGTGG GCGACCAGGT GCTCGCCATC GGCAACCCCT TCGGCGTCGG
CCAGACCGTC ACCAGCGGCA TCGTCAGCGC CCTGGGCCGC AGCCAGCTCG GCATCAACAC
CTTCGAGAAC TTCATCCAGA CCGACGCCGC CATCAACCCC GGCAACTCCG GCGGCGCGCT
GGTGGACATC AACGGCAATC TGATGGGCAT CAACACCGCC ATCTACTCCC GCTCCGGCGG
CAGCATGGGC ATCGGTTTCG CCATCCCCGT CTCCACCGCC AAGCTCGTGC TCGACGGCAT
CGTCAAGGAC GGCCAGGTCA CCCGCGGCTG GATCGGCGTG GAGCCCAACG AACTCTCGCC
CGAACTCGCC GCCACCTTCG GCGTACGCGC CACCGAAGGC GTCATCATCA CCGGCGTCCT
GCAGGACGGC CCCGCCGCCC GCGCCGGCAT CCGCCCCGGC GACGTGATCG TGCGCGTGGG
CGACAAGCCC ACCGACAACG TCTCGGCCCT GCTCAGCGCC GTCGCGGCCC TGAAGCCGGG
CGAGCCGGCG GCGTTCCAGT TGCAGCGGGG GGATGCGCAG CTGGAGTTGA ATGTGGTGCC
GGGGACGCGG CCGCAGCAGA GGGGGCAGCG GCGGTGAGGG GATTCATCTG TAGTTTCGTC
GTTGACTCTC TAATAGAAGC AGAAGCGCGA TGTTCGACGC GAGGGGCCGA AAACGCACGG
AGCGGCGAAT CGACGCCCGG AGCACCAAGC GCCGGCCGTC ACTGA
|
|---|
| Protein sequence | MAPLSPSASP PTATAAQSGD NVGLCRPTCH HEALLAAVFP GRDRVRRRLL RRRHPATGLD
PARRHAQQRR HLAHRGPARP LLPARGGQLQ RGGAQGGAGR RQHQHQQGRA QSAQQRPVVP
VLLRRPGRAA DADRPGQRRD RQPRRLHPHQ QPRRGRRGRD RGHPGRQPPH PRHRDRHRPG
HRPRHPEGGP RQAARHGAGQ LRPALRGRPG ARHRQPLRRR PDRHQRHRQR PGPQPARHQH
LRELHPDRRR HQPRQLRRRA GGHQRQSDGH QHRHLLPLRR QHGHRFRHPR LHRQARARRH
RQGRPGHPRL DRRGAQRTLA RTRRHLRRTR HRRRHHHRRP AGRPRRPRRH PPRRRDRARG
RQAHRQRLGP AQRRRGPEAG RAGGVPVAAG GCAAGVECGA GDAAAAEGAA AVRGFICSFV
VDSLIEAEAR CSTRGAENAR SGESTPGAPS AGRH
|
|---|
| |