Gene Aave_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1052 
Symbol 
ID4669609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1155257 
End bp1155655 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content64% 
IMG OID639822251 
Producthistidine triad (HIT) protein 
Protein accessionYP_969423 
Protein GI120609745 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG CGTTTCCAGA CCCGTTTTCT CTCTCCCACG CCATGCACGA TCCCGACTGC 
CTCTTCTGCA AGATCATCGC CGGCCAGATC CCCTCGCGGA AGGTCTATGA GGACGACGAA
GTCTTCGCCT TCCACGACAT CCACCCCGGC GCACCCGTCC ACTTCCTCAT GGTGCCCAAG
CAGCACGTGC ACTCCATGGC CGGCGTGACC GATGCCCATG CCGGCGTGCT CGGCCGCATG
ATGGTGCTGG CGCCGAAGCT GGCGCTGGAG CAGGGCTGCA ATCCCTATCC GGACGGCGGA
TTCCGCATCG TGGTAAATAC CGGTACTGAG GGTGGCCAGG AAGTGCACCA CCTCCATCTG
CACGTGATGG GCGGTCCCCG CCCCTGGCTG AAGGGCTGA
 
Protein sequence
MSDAFPDPFS LSHAMHDPDC LFCKIIAGQI PSRKVYEDDE VFAFHDIHPG APVHFLMVPK 
QHVHSMAGVT DAHAGVLGRM MVLAPKLALE QGCNPYPDGG FRIVVNTGTE GGQEVHHLHL
HVMGGPRPWL KG