Gene Aave_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1044 
Symbol 
ID4669427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1148681 
End bp1149697 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content72% 
IMG OID639822243 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_969415 
Protein GI120609737 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACTTG TAACGGGCGG GGCCGGATTC ATCGGCTCGC ATACCTGCGT GGCACTGGCC 
GAGGCCGGGC TGCCATTTCT CATCCTGGAC AACTTCTGCA ACAGCCGCCG CTCGGTACTG
GAGCGCGTGG GCCGCATCAC CGGCCGCGTG CCCGACCTGG TCGAGGGCGA CGTGCGGGAC
GAGGGCCTGC TGGCGCGGAT CTTCGCGGAG CATTCCATCG ATGCGGTGAT CCATTTCGCC
GCGCTCAAGG CGGTGGGCGA ATCGGTGCGG GAGCCGCTGT CGTACTACGA CAACAACGTG
GCCGGCACGG TGGCGCTGCT GCGCGCGATG CGCAAGGCGG ACGTCCGCAC CCTGGTGTTC
TCCTCGTCCG CGACGGTGTA CGGCGAGCCG GCCTCCCTGC CCATCCGCGA GGATTTCCCC
CTCTCGGCCA CCAACCCGTA CGGCCAGAGC AAGCTCATGA TGGAGCAGGT GCTGGCCGAC
GTGGACGCCT CCGAGCCCGG CCGCTGGCGC ATCGCCCGGC TGCGCTACTT CAACCCCGTG
GGCGCGCACG AAAGCGGCCT CATCGGCGAA GACCCGCAGG ACGTTCCCAA CAACCTGCTG
CCCTACGTGG CCCAGGTGGC CGTGGGGCTG CGCGAGCGCC TGAGCGTGTA TGGCGGCGAC
TACCCCACGC CGGACGGCAC GGGCGTGCGC GACTACATCC ACGTGTGCGA CCTGGCCGAT
GGCCACGTGG CGGCGCTGCG CTACCTGCGC GCGCACCCCG GCCTGCTCAC GGTGAACCTG
GGCACGGGGC GGCCCGTGTC GGTGCTGGAG ATGGTGCGCG GCTTCGAGGC CGCGAGCGGC
CGGCCGGTGC CCTACCAGGT GGTGGCGCGG CGGCCCGGGG ACGTGGCCGC CTGCTGGGCC
GACCCGGGGC TGGCCGAACG GCTGCTGGGC TGGAAGGCCC GCCACGGCCT CGACCGGATG
TGCGCCGACG CCTGGCGCTG GCAGGACGGC GTGGCCCGCG GCCTGCAGGC GGGCTGA
 
Protein sequence
MILVTGGAGF IGSHTCVALA EAGLPFLILD NFCNSRRSVL ERVGRITGRV PDLVEGDVRD 
EGLLARIFAE HSIDAVIHFA ALKAVGESVR EPLSYYDNNV AGTVALLRAM RKADVRTLVF
SSSATVYGEP ASLPIREDFP LSATNPYGQS KLMMEQVLAD VDASEPGRWR IARLRYFNPV
GAHESGLIGE DPQDVPNNLL PYVAQVAVGL RERLSVYGGD YPTPDGTGVR DYIHVCDLAD
GHVAALRYLR AHPGLLTVNL GTGRPVSVLE MVRGFEAASG RPVPYQVVAR RPGDVAACWA
DPGLAERLLG WKARHGLDRM CADAWRWQDG VARGLQAG