| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1042 |
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| Symbol | |
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| ID | 4668866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1141534 |
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| End bp | 1145571 |
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| Gene Length | 4038 bp |
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| Protein Length | 1345 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639822241 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_969413 |
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| Protein GI | 120609735 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGC GCAAATCCAG CTCCAGTGCC CAGCCCGCTG AGCGGCCCGT CCTGGCGCCG
CCCTGGCTGA TCACGCTGCT CGCCGGCATG GTGGGCGGCG GCCTGTGGCT GCTCTACCCG
CGGCAGGATC TGGAACGCCG GCTGGCCGAA ACCGAGAACT CCGCGCTCTC GGTCGCCTAC
CTGCACAACC TGCTGCGCAG CGATCCGGAC AACCCGCGCC TGCGGCTGCT GCTCGCGCAG
CGGCAGATCG CCGTCGGCCA GATGGGCGAC GCGCGCGCCA CGCTGCAACC CGCGCTGGAC
TCTTCCGACC CGCAGATCCA CCGCGACGCG CTCTGGGCGC TCTGGGAGCT GTCGTACACC
GAGTACCAGC GCACGCCCGA GCGGGAGGCC ACCTACCGCA AGGCCATGCG CGAGGACCTG
CTGCGGCAGC TGCGCGCGCT GTCCGCCGAG CCGTGGCCGC TGGAGCGCCG CGTGCTGCTG
ACGCGCCGCG CCGCCGAGCT GCAGGACCGC GTGCTCGGGG CCGCGATGAC CCGCAGGATG
GCCGAGGAGG CCTCCGATCC GCGGGAAGCC GCCCTGCTCT ACGAGCGCGC CGCGAAGGAG
GCCCTGGGCC AGTCGGACTA CGTCGGCTCC GCCGAGCTCT ACCTGCTGGC GCGCCGCGCT
ACGCCCGATG CGGACAAGGC CAAGGATTAC TACATGGCCG CGGTGCGCAC GCTGCAATCG
GGCAACCGGC CCGTGGACGC GCTGGAGATG GCCGAGCGCG AGATCGGCCC GCTGGCGAAG
GATCCGCAGG TGCTGCTGAT GATCACGCAA CTGGCGCGCG CGGCGGGCAA GCCCGCCGTC
GCGGACCGCT ATGTGCGGCA GTTGCTGCGC ATCTCCTGGC TGCGGCAATG GGAGGACGGC
GCCACCGCGC TGGCCGTGGC GGTGCCCCCC GTCGGCGCGA TGCTGCGCCC CATGGCCTGG
CACGGAGCCC CGCCCTCCGC CCCGGCTCCG GCACGGCGCT ACGACGACGG TGCCCATCTG
CTGCGCCCGC CCGTGATCCC GCTGCCGTCC GCGACCGGCG CCGACGCCGG TCCGGCACAC
GGCTGGGGTT TCCGCCCCAT GGCGGGCCCC GCCCCCACGG CCCCCGGGGC ACCTGCTGCT
CCGGCCGCCG CTCCCGCCCC CGCCGTCGCG GCCCCGCCCG TGCCGATCCC CGCGCACCTG
CTGCCCTACG ACGAGAAGAT CTACGGCATC GCGTTCGAGG TCTTCCTGGA AAACCGCAAG
CTCGACGACG CCTGGCTGAT AGCGCATGCC GCGGTGCAGG CCCGCCCGGA CGACATGGCC
TGGCGCGAGC GGCTCGCCCA GGTATCGGAA TGGTCGCAGC GGCCCGGCGT GGCGCTGCAG
AACTGGCTGG TGGTGGCCCA GCGCACGCAG AAGGAAGCCG CATGGCAGGC GGTGCTGCGG
ATCGCGCCCG GGCAGTTCGA CGACACCGCG CTGGTGCAGG CCATCCGCTT CCAGCTGCGC
CAGCGGCCCG ACGATTTCGC GCTGATCCGG CAGCTGGTGG CCACTTACGA ACGCATCGGC
GAGCCCCAGC CGGCCATCGA CTACCTGCGC CAGCACGGCA AGATACCCGA GGCGGTGGAA
CTGCTGGCCC AGCTGGCCGA GCGCGCGGGG CAACCCACGC TGGCACTGGA GACCTGGCGC
CGCCTGCTGG CGGACCCGAA GCAGCTCACG CCCGAACGGG CCATGCGCGC GGCCGTGCTC
GCACTCACCC ACGACCGGCC CGACGAGGGC CTGGGCTGGC TGGAGGCCGC GCAGCAGCGG
CAGGCGCCGT CGGAAGCTGC CGCCATGGAC TTCTGGCGCC TGACGGGCCA GTTGGCCGAG
AGCCGGCAGC GGCAGGCCCT GGCCGTGCAG GCCTACCGGG CGCTGGTGGG ATCCAAGGAC
CACGACCGCT CCGACTACGA TGCGCTGATC CGCCTGCTCA TGGCCGACCA GCCGCTCGAG
GCCGCCAAGG TGTCGGAGCT CGCCTGGGAG AAATTCGGCG ATCCGCGCTA CCTCGTGGAA
GCGCTGTCGG TCTATTCCAG CCGCAACCAG TGGGACGCGA TGGGCCCGCT GATGCGCAAG
CTCGAAGCCG GCCCGCAGGA GACGCGGCAG GCGGTCGCCG CCCTGCGGGA GATCCCCGAG
TTCCTGCGCC TGGCGGGCGG CTACTACCAG GCCCAGGGCG ACCTGGCCCG CGCGCGGCGC
TATTACGAGG ACGGCCTGCG CGCCAGCCCC GATTCGTCCG AGATGCGCCA GGCGCTGATC
TGGCTGTTCA TCGACAGCAA CGATGCCGTC GCGCTGCGCG CCCTGCTGAC CACGCAGGAG
CGCCGCTGGG CGCGCGACGA GGACGTGCAC GACGCGCTCG CCGCCGCCTA CCAGGCGCTC
TCGCTGCCGC AGGTGGCGCT GGAGCGCTAC CTCACGCCGC GCGTGGCGCA GCACCAGGAC
GATTTCCTGT GGCTCATGAA CTATGCGGAC GCGCTGGACC AGAACCAGCA GACCGACCGC
TCCTGGCGCC TGCGCCGCGA ACTGCTCTCG CGCGAATGGC GCGCGGCCCG CCAGGCAGGC
GAAGGCGGCA AGCGGCTCAC GCCGCAGCAG GCCCGCGCCC GGTGGCTCAC CGAGGAAGGG
CTGGACACCA CGCGCCGCGT GGCCCGCGTG CGCCTCATGC TCACCCAGCG GCCCGGCGAT
CCGGCGCTGG ACGTGCTGCG CGAACTGCTG CGCATGGACA CGGACGACCG CAACCGCATG
TCCAACGCGG CGGCGGAGAC CGCCATCGGC TGGCTGCAGG ATGCCGGCGA GTACACCGCC
GAGCGCGGCT ACCTCTGGCA GCAGTACGCC CGCGCCCGCG GCACGCGCAC CAACCGGCCG
CTCTGGGCCG AGATCACGGT GGCGCTGGCC GAGGACGACA AGGCCGCCAC GGGCCAGTTG
CTGGAAGGCT TCGACGAGCG CCTGCCCCGC TACGACCGCG TCAACGCCGC CCGCGCGGTG
GACGACGTGC GGCTCGCGCA GACCGCGGCC TTCGAGGCGC AGGGCGAGCA GCGGGAGGAC
GAGCCCCTGC AGCTGCAGCT CACCGAAACC CTGCTGGCGT TCAGCGACCA CGCCGGCGGC
TACGGCAAGA TCCAGCAGCT GGGTGGCCTG GACGAAGACG AGGCCGGCAG CCGTTTCCAC
ATCGCCTTCA ATCCGCGCAT GGCGCTGGAC CTGGAGTTCG CCAGCATCCG GCGCCGCTCC
ACCGACCCGC TGGTGGTGGT GAATCCGCCG GATGAAAGCG TGTTCGATGC CCGCCTGCAA
TGGCGCCATG CGGACGGGGA GACCACGCTG CGCGCGGGAC GCCGCGTGAG CTTCCAGCCC
TATACGCCCG TGCAGATCGA GCACGAGCAG CGCATCGACA ACCGCCTGTC GCTGCGCATG
GAACTGGGAT TCCAGCTACC CAGCCAGGAA AGCCTGGCGC TGCGCATCGC CGGCATGAAG
CGCCGCGCGG GCGCCAGCCT GCGCTACCAG GCAACGCGCC TGGACCGCTT CGTGCTCGAA
TACGCGGACG AGCGCTACCG CCTGCAGACC GGCGCCGACC TCGGCAGCGG ACGGCACACC
ACGCTGAGCT ATGTCCACAC CTACCGGCAG GAAGCGCCGC TGCTGGAGTT CGGCGCGTTC
TGGTCGCGCC ACGACTTCTC GCGCACCGAC ATCTTCTCGC TCGCCCCGCG CGACCGCGAG
TTCCAGCGCT ACCTGCTGCC CGGGATCGTT CCGGGGCCGG ACTACTTCCT GCCCGAAAGC
TTCACCTACT ACGGGCTGCA GGTATCGACC AACATGCGCT ACGAGGAAGA GTATTCCCGC
ACGCTGCGGC CCTACGCCAG CGCGAGCCGC ACCTGGCACA GCCGGCTCGG GCCGGGCTAT
GAGGTGCGCC TGGGCATGGC CGGCAGCGTG CTGGGCGGCG ACCACCTGGG CCTGACCTGG
GGCCTGAGCA AATCCGGACT GCAGCTGCAG CAGGGACTCA ACCGCAGCCT GCTCTTCAGC
TACCGGCTGC ATTTCTGA
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| Protein sequence | MLLRKSSSSA QPAERPVLAP PWLITLLAGM VGGGLWLLYP RQDLERRLAE TENSALSVAY
LHNLLRSDPD NPRLRLLLAQ RQIAVGQMGD ARATLQPALD SSDPQIHRDA LWALWELSYT
EYQRTPEREA TYRKAMREDL LRQLRALSAE PWPLERRVLL TRRAAELQDR VLGAAMTRRM
AEEASDPREA ALLYERAAKE ALGQSDYVGS AELYLLARRA TPDADKAKDY YMAAVRTLQS
GNRPVDALEM AEREIGPLAK DPQVLLMITQ LARAAGKPAV ADRYVRQLLR ISWLRQWEDG
ATALAVAVPP VGAMLRPMAW HGAPPSAPAP ARRYDDGAHL LRPPVIPLPS ATGADAGPAH
GWGFRPMAGP APTAPGAPAA PAAAPAPAVA APPVPIPAHL LPYDEKIYGI AFEVFLENRK
LDDAWLIAHA AVQARPDDMA WRERLAQVSE WSQRPGVALQ NWLVVAQRTQ KEAAWQAVLR
IAPGQFDDTA LVQAIRFQLR QRPDDFALIR QLVATYERIG EPQPAIDYLR QHGKIPEAVE
LLAQLAERAG QPTLALETWR RLLADPKQLT PERAMRAAVL ALTHDRPDEG LGWLEAAQQR
QAPSEAAAMD FWRLTGQLAE SRQRQALAVQ AYRALVGSKD HDRSDYDALI RLLMADQPLE
AAKVSELAWE KFGDPRYLVE ALSVYSSRNQ WDAMGPLMRK LEAGPQETRQ AVAALREIPE
FLRLAGGYYQ AQGDLARARR YYEDGLRASP DSSEMRQALI WLFIDSNDAV ALRALLTTQE
RRWARDEDVH DALAAAYQAL SLPQVALERY LTPRVAQHQD DFLWLMNYAD ALDQNQQTDR
SWRLRRELLS REWRAARQAG EGGKRLTPQQ ARARWLTEEG LDTTRRVARV RLMLTQRPGD
PALDVLRELL RMDTDDRNRM SNAAAETAIG WLQDAGEYTA ERGYLWQQYA RARGTRTNRP
LWAEITVALA EDDKAATGQL LEGFDERLPR YDRVNAARAV DDVRLAQTAA FEAQGEQRED
EPLQLQLTET LLAFSDHAGG YGKIQQLGGL DEDEAGSRFH IAFNPRMALD LEFASIRRRS
TDPLVVVNPP DESVFDARLQ WRHADGETTL RAGRRVSFQP YTPVQIEHEQ RIDNRLSLRM
ELGFQLPSQE SLALRIAGMK RRAGASLRYQ ATRLDRFVLE YADERYRLQT GADLGSGRHT
TLSYVHTYRQ EAPLLEFGAF WSRHDFSRTD IFSLAPRDRE FQRYLLPGIV PGPDYFLPES
FTYYGLQVST NMRYEEEYSR TLRPYASASR TWHSRLGPGY EVRLGMAGSV LGGDHLGLTW
GLSKSGLQLQ QGLNRSLLFS YRLHF
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