| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1022 |
|---|
| Symbol | |
|---|
| ID | 4669747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1121507 |
|---|
| End bp | 1122811 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639822222 |
|---|
| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_969394 |
|---|
| Protein GI | 120609716 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
|---|
| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.558176 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAAC TCCAGATTCG CGGCGGCCGT GCCCTGAGCG GCGACGTGCC GATCTCCGGC
GCAAAGAACG CCGCATTGCC CGAGCTGTGC GCCGCGCTGC TCACGGCCGA ACCCGTCACC
CTCCTGAACG TGCCGCGGCT GCAGGACGTG GCGACCATGC TGCAGCTCAT CCGCAACATG
GGCGTGGCGG CCGAGCATTC CCAGGGCGAC GACCGCGCCA GCAGCGGCAC GGTGCGCATC
GATGCCGGCG CGCTGTCCAC GCCCGAGGCG CCCTACGAGC TGGTCAAGAC CATGCGCGCG
TCGGTGCTGG CGCTGGGCCC GCTGCTGGCG CGTTTCGGCG AGGCCACGGT GTCGCTGCCC
GGTGGCTGCG CCATCGGCTC GCGCCCCGTG GACCAGCACA TCAAGGGCCT GTCGGCCATG
GGCGCGGAGA TCGTGGTGGA GCACGGCTAC ATGATCGCGC GTCTGCCCGA GGGCCGTTCG
CGCCTGCAGG GCGCCCGCAT CACCACCGAC ATGGTCACGG TGACCGGCAC CGAGAACCTG
CTCATGGCGG CCACGCTGGC GGATGGCGAG ACCGTGCTGG AGAATGCGGC CCAGGAACCC
GAGGTGGTGG ACCTGGCCGA GATGCTCATC GCCATGGGCG CGCAGATCGA GGGCCACGGC
ACGAGCCGCA TCCGGGTGCA GGGCGTGGAG CGCCTGCACG GCTGCACGCA CCGCGTGGTG
GCCGACCGCA TCGAGGCCGG CACCTTCCTG TGCGCGGTGG CCGCGACGGG CGGCGAGGCG
CTGCTGCGCC ATGGCCGCGC CGACCACCTG GACGCCGTCA TCGACAAGCT GCGCGACGCG
GGCGTCACCG TGGAGGCCGT CGATGGCGGC ATCCGCGTGC GCAGCCCGGG CGCGGGCCAG
TTGCAGGCGC AGAGCTTCCG CACCACCGAG TACCCGGGGT TTCCCACGGA CATGCAGGCG
CAGTTCATGG CGCTCAACGT GGTGGCGCAG GGTACTTCGC GCGTGACCGA GACCATTTTC
GAGAACCGCT TCATGCACGT GGACGAATTG CTGCGCCTGG GCGCGCGCAT CCAGGCCGAC
GGCAAGGTGG CGGTGATCGA GGGGCTCGGC GACACGGGCG CGCTGCTGTC GGGCGCCACC
GTGATGGCCA CCGACCTGCG CGCTTCCGCG AGCCTGGTGA TCGCCGGCCT CGTGGCCACG
GGCCAGACCA CGGTGGACCG CATCTACCAC CTCGACCGCG GCTACGACTG CATGGAAGGC
AAGCTGCGCG CCCTGGGCGC CGATATCGAA AGGGTGAAGG CATGA
|
|---|
| Protein sequence | MDQLQIRGGR ALSGDVPISG AKNAALPELC AALLTAEPVT LLNVPRLQDV ATMLQLIRNM
GVAAEHSQGD DRASSGTVRI DAGALSTPEA PYELVKTMRA SVLALGPLLA RFGEATVSLP
GGCAIGSRPV DQHIKGLSAM GAEIVVEHGY MIARLPEGRS RLQGARITTD MVTVTGTENL
LMAATLADGE TVLENAAQEP EVVDLAEMLI AMGAQIEGHG TSRIRVQGVE RLHGCTHRVV
ADRIEAGTFL CAVAATGGEA LLRHGRADHL DAVIDKLRDA GVTVEAVDGG IRVRSPGAGQ
LQAQSFRTTE YPGFPTDMQA QFMALNVVAQ GTSRVTETIF ENRFMHVDEL LRLGARIQAD
GKVAVIEGLG DTGALLSGAT VMATDLRASA SLVIAGLVAT GQTTVDRIYH LDRGYDCMEG
KLRALGADIE RVKA
|
|---|
| |