Gene Aave_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1015 
Symbol 
ID4668660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1116649 
End bp1117140 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content66% 
IMG OID639822215 
Producthypothetical protein 
Protein accessionYP_969387 
Protein GI120609709 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCATT CCAAGAACGA CGTCTGGGTC GGCCTCTTCG TCCTCCTCGG CGGTGCGGCC 
CTGCTCTTCC TCGCCCTGCA GTCGGCCAAC CTGCTGCGCG TGCAGTGGCA GTCCGGCTAC
CACGTCACCG CGCTCTTCGA CAACATCGGC GGGCTCAAGC CCCAGTCCGC GGTGCGCAGC
GCCGGCGTGG TGGTCGGGCG GGTGAATTCC ATCACCTTCG ACGACAAGAC CTTCCAGGCC
CAGGTGACGC TGGAGATGGA CAAGCGCTAC GCCTTCCCCA AGGACAGCTC GCTCAAGATC
CTCACCAGCG GCCTGCTGGG CGACCAGTAC ATCGGCATCC AGGCGGGTGC CGACGAAAAG
AACCTCGCCG AGGGCGACCG CATCACGTCA ACGCAGTCCG CGGTGGTGCT GGAAAACCTC
ATCGGCCAGT TCCTCTACGG CAAGGCCGAA GAGGGCGGCG GCGGGGCCTC CGCGGGCGGC
TCCAAGAAAT GA
 
Protein sequence
MQHSKNDVWV GLFVLLGGAA LLFLALQSAN LLRVQWQSGY HVTALFDNIG GLKPQSAVRS 
AGVVVGRVNS ITFDDKTFQA QVTLEMDKRY AFPKDSSLKI LTSGLLGDQY IGIQAGADEK
NLAEGDRITS TQSAVVLENL IGQFLYGKAE EGGGGASAGG SKK