Gene Aave_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1014 
Symbol 
ID4667807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1115828 
End bp1116610 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID639822214 
Producthypothetical protein 
Protein accessionYP_969386 
Protein GI120609708 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGT GGAAACCTTC CGATGTCGGC TTCGCCACGC GCAGCCTGCT GGCGGACATG 
GGCCGCGCGG CGCGGCTGTT CGTGCGTCTG GCCGGCCTGA TCGGCCCGAC CCTGCAGCGC
TTCGGGCTGG TGCGCGACCA GTTGCACTTC CTGGGCAACT ATTCGCTGTC CATCATTTCC
GTGTCGGGCC TGTTCGTGGG CTTCGTGCTG GGCCTGCAGG GCTACTACAC GCTGCAGCGC
TACGGCTCCG CGCAGGCGCT GGGCCTGCTC GTGGCGCTGT CGCTGGTGCG CGAGCTCGGC
CCCGTCGTCT CCGCGCTGCT GTTCGCGGGC CGCGCTGGCA CTTCGCTCAC GGCGGAGATC
GGCCTGATGC GCGCGGGCGA GCAGCTCTCG GCCATGGAGA TGATGGCCGT GGACCCGGTG
CGCCGCATCC TGGCCCCGCG CTTTTGGGCC GGGGTGATCG CGATGCCGCT GCTGGCCGCG
GTGTTCAGCG CGGTGGGCGT GATCGGCGGC TGGATCGTCG GCGTGGTCAT GCTCGGCGTG
GACGGCGGTG CCTTCTGGGG CCAGATGCAG AGCGGGGTGG ACGTGTGGGC GGACGTGGGC
AACGGCGTGC TCAAGAGCTT CGTCTTCGGC GTCACGGTCA CTTTCATCGC CCTGCTGCAG
GGCTACATCG CCAAGCCCAC GCCCGAGGGC GTGTCCCGCG CCACCACCCG CACCGTGGTG
ATGGCCTCGC TCACGGTGCT GGGGCTGGAT TTCCTGCTCA CGGCCTGGAT GTTCAGCATC
TGA
 
Protein sequence
MSWWKPSDVG FATRSLLADM GRAARLFVRL AGLIGPTLQR FGLVRDQLHF LGNYSLSIIS 
VSGLFVGFVL GLQGYYTLQR YGSAQALGLL VALSLVRELG PVVSALLFAG RAGTSLTAEI
GLMRAGEQLS AMEMMAVDPV RRILAPRFWA GVIAMPLLAA VFSAVGVIGG WIVGVVMLGV
DGGAFWGQMQ SGVDVWADVG NGVLKSFVFG VTVTFIALLQ GYIAKPTPEG VSRATTRTVV
MASLTVLGLD FLLTAWMFSI