| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_1013 |
|---|
| Symbol | |
|---|
| ID | 4667641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1114911 |
|---|
| End bp | 1115831 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639822213 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_969385 |
|---|
| Protein GI | 120609707 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCAT GTATGTTTGC GTTACCATCG CTCGCATCGC CAACGGCCGC ACCCGCGACA
ATTACGTTCC CAACCGACAT TTCCAACGCC CTCTGCATGT CCGAAACCCC CCTGGTCGAA
CTGCGCAACG TCACGTTCTC GTACGGTGAG CGCCCGATCC TGCGCGATGT CTCGCTGCGC
ATCCCGCGCG GCAAGGTGAC TGCGCTCATG GGCGCCTCCG GCGGGGGCAA GACCACGGTG
CTGCGCCTCA TCGGCGGGCA GCACCTCGCG CAGCAGGGCG AAGTGCTGGT GAACGGCCAG
GACGTCGCGC GCATGGACAC GCAGCAGCTC TACGCCGCGC GCCGTCGCAT GGGCATGCTG
TTCCAGTTCG GGGCGCTCTT CACCGACATG AGCGTGTTCG AGAACGTGGC CTTTCCGCTG
CGCGAGCACA CCGACCTGTC CGAGGCGCTG GTGCGCGACA TCGTGCTCAT GAAACTGCAG
GCCGTGGGCC TGCGGGGCGC ACGCGACCTG ATGCCCAGCC AGATCTCGGG CGGCATGGCG
CGGCGCGTGG CGCTGGCGCG GGCCATCGCG CTCGATCCGG AGCTGATCCT CTACGACGAG
CCCTTCGCCG GGCTCGATCC CATCTCGCTC GGCACGGCCG CGCAGCTGAT CCGGCAACTC
AACGACGCCA TGGGCCTGAC CACGCTGGTC GTGTCCCACG ACGTGGAGGA AACCTTCCGC
GTGGCGGACC ACGTCGTCAT CCTCGGGCCG GGCGTGGTCG CCGCGCAGGG CTCGCCCGAC
GAGGTGCGTG CCAGCACCGA TCCGCTGGTG CACCAGTTCG TGCATGCGCT GCCCACCGGG
CCGGTGCCGT TCCATTACCC CGGCCCTTCG GTGGCCGACG ATTTCGGGCC GCTGGCCGGC
CCGGGCGGAG GCGCGCGATG A
|
|---|
| Protein sequence | MHACMFALPS LASPTAAPAT ITFPTDISNA LCMSETPLVE LRNVTFSYGE RPILRDVSLR
IPRGKVTALM GASGGGKTTV LRLIGGQHLA QQGEVLVNGQ DVARMDTQQL YAARRRMGML
FQFGALFTDM SVFENVAFPL REHTDLSEAL VRDIVLMKLQ AVGLRGARDL MPSQISGGMA
RRVALARAIA LDPELILYDE PFAGLDPISL GTAAQLIRQL NDAMGLTTLV VSHDVEETFR
VADHVVILGP GVVAAQGSPD EVRASTDPLV HQFVHALPTG PVPFHYPGPS VADDFGPLAG
PGGGAR
|
|---|
| |