Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1009 |
Symbol | gltD |
ID | 4667677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1110548 |
End bp | 1112026 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822209 |
Product | glutamate synthase subunit beta |
Protein accession | YP_969381 |
Protein GI | 120609703 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAGA CCACCGGCTT CATGGAATAT GAGCGCATCG AGGAGGGCTA CAAGCCCGTC GCCGAGCGCC TGAAGCACTA CAAGGAATTC GTCATCGGCC TCGATGACGC GCAGGCCAAG CTGCAGGGCG CGCGCTGCAT GGACTGTGGC ACTCCGTTCT GCAACAACGG CTGCCCGGTC AACAACATCA TTCCGGACTT CAACGACCTG GTCTACCAGC AGGACTGGAA GAGCGCCTGG GCCGTGCTGG ACTCGACCAA CAACTTCCCC GAGTTCACCG GCCGCATCTG TCCCGCGCCC TGCGAGGCCG CCTGCGTGCT GAACGTGAAT GACGACCCGG TGGGCATCAA GTCCATCGAG CACGCCATCA TCGACCGCGC CTGGGCCGAG GGCTGGGTGA AGCCGCGCCC GGCCAAGCAC AGGACCGGCA AGAAAGTGGC CGTGGTGGGC TCCGGCCCCG CGGGCATGGC GGCCGCCCAG CAGCTCGCGC GCGCCGGCCA CGACGTGACG CTCTTCGAGA AGAACGACCG CATCGGTGGC CTGCTGCGCT ACGGCATTCC CGACTTCAAG ATGGAGAAGT CGCACATCGA CCGCCGCGCC GAGCAGATGA AGGCCGAAGG CGTGCAGATC CGCACCGGCG TGCTCGTCGG CACGGCCAAG GACGGTCTGG GCAAGGGCTC CAAGGTCACC AACTGGGCCA GGGAAACCGT GACGCCCGAG CAACTGCAGG CCGAGTTCGA CGCCGTGCTG CTGGCCGGTG GCGCCGAGCA GAGCCGCGAC CTGCCCGTGC CGGGCCGCGA GCTGGACGGC GTGCATTTCG CGATGGAGTT CCTGCCCCAG CAGAACAAGG TGAATGCGGG CGACAAGCTC AAGGGCCAGA TCCGCGCGGA CGGCAAGCAC GTCATCGTGA TCGGCGGCGG CGACACGGGC AGCGATTGCG TGGGCACGAG CAACCGCCAC GGTGCCGCGA GCGTGACGCA GTTCGAGCTG ATGCCCCAGC CGCCCGAGGT GGAAAACCGC CCGCTCACCT GGCCCTACTG GCCCTACAAG CTGCGCACCA GCTCGAGCCA CGAAGAGGGC TGCGAGCGCG AGTTCGCCAT CGCCACGAAG GAATTCATCG GCGAGAAGGG CAAGGTCACG GGCCTGAAGA CCGTGCGCGT CGAATGGAAG GACGGCAAGA TGGTCGAGGT GGCCGGCTCC GAGCAGACGC TCAAGGCCGA CCTCGTGCTG CTGGCCATGG GCTTCGTGAG CCCCGTGTCG CCGGTGCTGG AGGCCTTCGG CGTCGAGAAG GACGCGCGCG GCAACGCCCG CGCCACGACG GAGTTCACCG GCGGCTACGC GACCAACGTG CCCAAGGTAT TCGCTGCCGG CGACATGCGC CGCGGCCAGT CCCTGGTGGT GTGGGCCATC CGCGAAGGCC GGCAGGCCGC GCGGGCGGTG GACGAGTTCC TGATGGGTTA CTCCGACCTG CCGCGCTGA
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Protein sequence | MGKTTGFMEY ERIEEGYKPV AERLKHYKEF VIGLDDAQAK LQGARCMDCG TPFCNNGCPV NNIIPDFNDL VYQQDWKSAW AVLDSTNNFP EFTGRICPAP CEAACVLNVN DDPVGIKSIE HAIIDRAWAE GWVKPRPAKH RTGKKVAVVG SGPAGMAAAQ QLARAGHDVT LFEKNDRIGG LLRYGIPDFK MEKSHIDRRA EQMKAEGVQI RTGVLVGTAK DGLGKGSKVT NWARETVTPE QLQAEFDAVL LAGGAEQSRD LPVPGRELDG VHFAMEFLPQ QNKVNAGDKL KGQIRADGKH VIVIGGGDTG SDCVGTSNRH GAASVTQFEL MPQPPEVENR PLTWPYWPYK LRTSSSHEEG CEREFAIATK EFIGEKGKVT GLKTVRVEWK DGKMVEVAGS EQTLKADLVL LAMGFVSPVS PVLEAFGVEK DARGNARATT EFTGGYATNV PKVFAAGDMR RGQSLVVWAI REGRQAARAV DEFLMGYSDL PR
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