Gene Aave_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1006 
Symbol 
ID4667939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1103828 
End bp1104790 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID639822206 
Producthypothetical protein 
Protein accessionYP_969378 
Protein GI120609700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.945095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA CCGCACGGAT GGCCGCGCAG GTACTGAAAG CCCCGGCGGC GCGCCGCAAT 
GCAGGCGCGG GTGCGGATGC CCAGGTGCTG CAGGAACTGC GGCCCGGCCA GTCCGTGGAA
CTGCTCAAGG AACTGCACAT CCTCACGCGC GAAGGACGGC TCAACCAGGA TTCGCGCCGC
AAGCTCAAGC AGGTGTACCA CCTGTTCCAG TTCATCGAGC CCCTGCTGCG CGAGTTCGCG
CAGGACGGGC AGGCCCCCAC GCTGGCGGAC CACGGCGCCG GAAAATCGTA CCTGGGATTC
ATCCTCTACG ACCTGTTCTT CCGGGAACTG GGGCGCGGCC ACATCTACGG CATCGAGACG
CGGGCCGAAC TGGTGGAGCG CTCGCAGGCG CTGGCCCATC GCCTGGGCTT CGAACGCATG
TCGTTCCTGG CCCTGAGCGT GGCCGACTCC ATGCAGGCCG ATGCCCTGCC TGCGCGCTTC
GACGTGGTGA CGGCGCTCCA CGCCTGCGAT ACCGCGACGG ACGATGCGAT CGCCTTCGGG
CTGGCCAAGC AGGCGCGCGC CATGGTGCTG GTGCCGTGCT GCCAGGCCGA GGTCGCGGCG
TGCCTGCGGC AGAACAAGGC CCTGGCCCTG GCGCGCACGC CCCTGGCCGA GCTGTGGCGC
CATCCGCTGC ACACGCGCGA GCTGGGCAGC CAGTTGACCA ATGTGCTGCG CTGCCTGTAC
CTGGAAGCCA GCGGCTACCA GGTCACGGTG ACGGAACTGG TGGGCTGGGA GCACAGCATG
AAAAACGAGT TGATCGTGGC CCGGCATACC GGCCAGCGCA AGCGCAGTGC GGCCGAGCGG
CTGCGTGCGA TCCTCGCCGA GTTCGGGCTG GAGCGGGAAC TCGGTCCGCG CTTCGGCCTG
GCGGGCGATG ACGGCGCGAA CGCAGGCGAC GAAAGGGCGG CTGCCCAGGG CGTGCCGGCC
TGA
 
Protein sequence
MKKTARMAAQ VLKAPAARRN AGAGADAQVL QELRPGQSVE LLKELHILTR EGRLNQDSRR 
KLKQVYHLFQ FIEPLLREFA QDGQAPTLAD HGAGKSYLGF ILYDLFFREL GRGHIYGIET
RAELVERSQA LAHRLGFERM SFLALSVADS MQADALPARF DVVTALHACD TATDDAIAFG
LAKQARAMVL VPCCQAEVAA CLRQNKALAL ARTPLAELWR HPLHTRELGS QLTNVLRCLY
LEASGYQVTV TELVGWEHSM KNELIVARHT GQRKRSAAER LRAILAEFGL ERELGPRFGL
AGDDGANAGD ERAAAQGVPA