Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0997 |
Symbol | |
ID | 4666790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1094201 |
End bp | 1094815 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639822197 |
Product | fimbrial assembly family protein |
Protein accession | YP_969369 |
Protein GI | 120609691 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCTCA TCAACCTGCT GCCCCACCGC GAGGCAGCCC GGAAACGCCG CAAGGAAGCC TTCCAGGTGG CGATGTTCGC GTCGTTCCTG ATGGGCCTCG CGATCGCCGC CGTCGTCTAT TGGTGGTTCC AGATGATGAT CGGAGAGCAG CAGGGGCGCA ATGCCTTCCT GCAGTCCGAG ATCCAGGTCC TGGAGGGGCA GATCAAGGAA ATCGCCACGA TCGAAGAGGA AATCGCTGCC CTGCGTGCGC GCCAGAAGGC GGTGGAGGAT CTCCAGTCCG ACCGCAACCT GCCCGTCCAT CTGCTTTCGG AACTGGTGCG GCAGCTGCCT GACGGTGTCT ACATCACGAG TCTGAAGCAG GCGGACCAGG TCATCACCAT GCAGGGCATG GCGCAATCCA ACGAGCGCGT CTCGGAGATG CTGCGCAACC TGGCGGACAA CACCCCGTGG TTCTCCAAGC CCGAGCTGGT GGAGATCGTG GCCACGAACG TGGCCCTGAC GCCGCGCGAC CAGCGCCGGG TGGCTTCGTT CAACGTGCGT TTCCGGCTCA TGCGGACCAG CGAGGCGCAG AAGGCCATGG ACGGCGCGAG CGCGCCGCGC GCGGCGGGGG GATGA
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Protein sequence | MILINLLPHR EAARKRRKEA FQVAMFASFL MGLAIAAVVY WWFQMMIGEQ QGRNAFLQSE IQVLEGQIKE IATIEEEIAA LRARQKAVED LQSDRNLPVH LLSELVRQLP DGVYITSLKQ ADQVITMQGM AQSNERVSEM LRNLADNTPW FSKPELVEIV ATNVALTPRD QRRVASFNVR FRLMRTSEAQ KAMDGASAPR AAGG
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