Gene Aave_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0980 
Symbol 
ID4666206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1076242 
End bp1077105 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID639822180 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_969352 
Protein GI120609674 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.975069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCG CGTTCCGCTT CTTCGCCCGA TGGCCATTGC CTGCGCTCCA TGCGCTGGGC 
GCGGTGCTGG GCTGGATCGC GTTCCTCGCG TCGCCCACCT ACCGCCGCCG CTTCCTCGCC
AATGCTCGCC TGGCCGGCTA TCCCTTCGTG CGCGTGCGCG CCGCGGTGGC CCACGCGGGC
CGCATGGCGG CCGAGCTGCC GCGCCTGTGG CTGCGCGCCG AGGCGCCGCC GTTCCGCATG
GAGGGGGCGG AGTGCGTGGA ACAGGCCTGG GCGGCTGGCC GGGGCATCGT CTTCCTCACG
CCGCACATCG GCTGCTTCGA GCTGTCGGTG CAGATCGCGG CGCGGCGCTG GGCCGGGGAG
CACGGCCCCG TTACGGTACT CTACCGGCCC GCCCGGCAGG CCTGGCTCGC GGAACTCATG
CGCACGGCGC GCGACCGGCC AGGGATCCGG GCAGTGCCCA CCACGCTCTC GGGCGTGCGG
CAGATGATCA AGGCGCTGCG CCGCGGCGAG GCCGTGGGCC TGCTGCCCGA CCAGGTGCCG
CCCGAAGGGC AGGGTCTTTG GGCGCCGTTC TTCGGACTGC CGGCCTATAC GATGACGCTC
GCCGCCCGCC TGGTGCAGCA GACAGGCGCC ACGGTGGTCC TGGCACGCTG CGAGCGCCTG
CCGCGCGGCC GCGGCTACGT GCTGCACCTC GAGCCCCTGG CCGAGCCGCT TTCCCCTTCC
CTCGAAACCG CCGTCCTGCA GATCAACCAA TCCATGGAAC GCATCATCCG ACACTCTCCC
GACCAATACC TCTGGGGCTA CGGGCGCTAC AAGCAACCGC GGGCCGAGGC ATCCACGCCG
GCCGTGCCGG GAGCGGACGC ATGA
 
Protein sequence
MPPAFRFFAR WPLPALHALG AVLGWIAFLA SPTYRRRFLA NARLAGYPFV RVRAAVAHAG 
RMAAELPRLW LRAEAPPFRM EGAECVEQAW AAGRGIVFLT PHIGCFELSV QIAARRWAGE
HGPVTVLYRP ARQAWLAELM RTARDRPGIR AVPTTLSGVR QMIKALRRGE AVGLLPDQVP
PEGQGLWAPF FGLPAYTMTL AARLVQQTGA TVVLARCERL PRGRGYVLHL EPLAEPLSPS
LETAVLQINQ SMERIIRHSP DQYLWGYGRY KQPRAEASTP AVPGADA