Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0936 |
Symbol | |
ID | 4666079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 1017943 |
End bp | 1019523 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639822136 |
Product | extracellular solute-binding protein |
Protein accession | YP_969308 |
Protein GI | 120609630 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCC CACGCACGGC ATTGCGCGCC GCCTTCGGCG CCTCCCTGAT CGCGGCGGCC TGCATGGCGG GCGCGCAGAC CATCCGGGTC GCCAACCAGG GCGACGCGCT GTCGATGGAT CCGCATTCCC TGAACGAGAG CCTGCAGCTC AGCGTGACCG GCAATATCTA TGAGCCGCTC GTGGGCCGCA ACAAGGACCT GAGCCTGGCG CCGGCGCTGG CCACGCGCTG GGCACAGCTC TCTCCCACGG TGTGGCGCTT CGAACTGCGG CGTGGCGTGC TTTTCCACGA CGGCACTCCG TTCACCGCGG ACGACGTGCT GTTTTCGCTG GCACGCACGC AGGCCGGGAG TTCGGACATG AAGACGTACA CCAACGACTT CAAGGAAGTG CGCAAGGTGG ACGACTACAC CGTCGAGATC GAGACCAAAG CTCCGTACCC CATCCTGCCC GATGTGCTCA CGCTCGTGTA CATGATGTCG CGCAAGTGGT GCGAGACGAA CCACGCCACG GAGCCGGTGG ATCGGCGCAG GGGCGTGGAG AACGCGGCGT CGTTCCGGGC CAACGGCACG GGGCCGTTCC GGCTGCGCGA GCGCCAGCCC GGCGTGCGTA CCGTGTTCAC GCGCAACGCG CAGTACTGGG GGGCCATCGA AGGCAACGTG TCCGAGGTGG TGTTCACCCC CATCGGCAAC GACGCCACCC GCGTCGCGGC GCTGCTGTCG GGCCAGGTGG ACGTCATGGA GCCCGTGCCG GTGCAGGACA TCGAGCGCGT GAACACGAGT CCGCTCACGC GCGCAGTGAC CGGGCCCGAG CTGCGCACCA TCTTCCTGGG CATGGACCAG AAGCGCGACG AGCTGCTGTA TTCCAGCGTG AAGGGCAAAA ACCCGTTCAA GGACAAGCGC GTGCGCCAGG CCTTCTACCA GGCCATCGAC ATCGAGGGCA TCCGCAAGAC GGTGATGCGC GGCGCCTCCA ATCCGTCGGC GCTGCTGGTG GGGCCGGGCG TGAACGGTTT CCAGGCGGAT ATCAAGCGCC TTCCCTACGA CACGGATGCC GCGAAGAAGC TGCTGGCCGA AGCCGGCTAC CCCAACGGCT TCGAGGTGGG CATGAACTGC CCCAACGACC GCTACGTGAA TGACGCGCGC ATCTGCCAGG CAGTGGCCGC CAACCTCGCG CGCATCGGCG TGAAGGTGAA CCTGCAGGCG GAAACCAAGG GCACGTACTT CCCCAGGGTG CTGCGGCGGG ATACCAGCTT CTACATGCTG GGCTGGATGC CCGCCACCTA CGACGCGCAC AACGCGATGA CTGCGCTGAT GGCCTGCGTG GACGACAAGG GCGCCGGGCA GTTCAACCTG GGCGGGTACT GCAATCCCAA GGTGGACCAG CTCACGCGGC AGGTGCAGTC GGAGGTCGAC AAGGCCCGGC GCGACGCGAT GATCCGCGAA GCCTTCGAGA TCCATGCGGC CGACGTGGGC CACATCCCGC TGCACCAGCA GGCCCTGGCC TGGGGCGTGT CGCGCAAGGT GGCGCTGGTG CAGATGGCCG ACAACTTCAT GCCGTTCAAG TGGATGAGCC TCGCGAAGTG A
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Protein sequence | MNFPRTALRA AFGASLIAAA CMAGAQTIRV ANQGDALSMD PHSLNESLQL SVTGNIYEPL VGRNKDLSLA PALATRWAQL SPTVWRFELR RGVLFHDGTP FTADDVLFSL ARTQAGSSDM KTYTNDFKEV RKVDDYTVEI ETKAPYPILP DVLTLVYMMS RKWCETNHAT EPVDRRRGVE NAASFRANGT GPFRLRERQP GVRTVFTRNA QYWGAIEGNV SEVVFTPIGN DATRVAALLS GQVDVMEPVP VQDIERVNTS PLTRAVTGPE LRTIFLGMDQ KRDELLYSSV KGKNPFKDKR VRQAFYQAID IEGIRKTVMR GASNPSALLV GPGVNGFQAD IKRLPYDTDA AKKLLAEAGY PNGFEVGMNC PNDRYVNDAR ICQAVAANLA RIGVKVNLQA ETKGTYFPRV LRRDTSFYML GWMPATYDAH NAMTALMACV DDKGAGQFNL GGYCNPKVDQ LTRQVQSEVD KARRDAMIRE AFEIHAADVG HIPLHQQALA WGVSRKVALV QMADNFMPFK WMSLAK
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