Gene Aave_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0935 
Symbol 
ID4665926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1016686 
End bp1017933 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content70% 
IMG OID639822135 
Productamidohydrolase 
Protein accessionYP_969307 
Protein GI120609629 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG CAGCAGCCAA GCCGGCACTG TCCGCGCCGC CCCGCCTGCG GGCCGGCGGC 
CGCGCCTTCG CCCACATCGC CCAGTTCCAC CCCGAGCTGA CCGCGTTCCG CCGCGACCTG
CATGCCCATC CCGAACTGGG TTTCGAAGAG GTCTATACGG GCTCCCGCGT GAAGGAGGCG
CTCAAGGTCT GCGGGGTGGA CGAGATCCAC GACGGCATCG GCCGTACCGG CATCGTGGCG
GTGATCCACG GGCGCAGCCG TTCCAGCGGC AGCATGATCG GCCTGCGCGC CGACATGGAC
GCCCTGCCCA TGTCGGAGCA GAACGAGTTC ACCTGGAAGT CCTGCAAACC CGGACTCATG
CACGGCTGCG GTCACGACGG CCACACGGCC ATGCTGGTGG GGGCCGCGCG CTACCTCGCC
GCCACGCGCC ATTTCGACGG CACGGCCGTG CTCATCTTCC AGCCCGGCGA GGAGGGCTTC
GGCGGTGCGC GCGTGATGAT CGAGGACGGC CTGTTCGAGC GCTTTCCCGT GCAGTCGGTC
TATGCCATGC ACAACTGGCC GGCCATGCAG CCGGGCACCA TCGGACTCAA TTCCGGGGCG
ATGATGGCAT CGGCCGACCG CATCACCATC GAGATCACCG GCCGCGGCGG ACATGGTGCG
CACCCGTACC AGACGGTGGA CGTGGTGCTC GTGGCCGCGC ACATCATCAC CGCGGTGCAG
GGCATCGTCT CGCGCAACGT GCGCCCGCTC GACAGCGCGG TGATCAGCCT CTGCGCCATG
CAGGCGGGCG ACCTCGGGGC CTTCAGCGTG CTGCCCGGCA CGGCCACGCT GGTGGGCACG
GTGCGCACGT TCTCGCCCGC GGTGCAGGAG ATGATCGAGC AGCGCCTCAA GGACCTGTGC
AGCGCGGTGG CGCTGGGCTT CGGCGCCACG GCCTCCGTGC GCTACGAACG CATCTACCCC
GCGACCATCA ACACCGAAAG CGACGCGCAG TTCGCGGGCG ACGTGGCAGT GTCGATCGTC
GGGGCCGAGA ACGTGGTGCG CGACCTGGAG CCCAGCATGG GCGCGGAAGA CTTCTCCTTC
ATGCTGCAGA GCAAGCCGGG CGCCTACCTG CGCATCGGGC AGGGCACCGG GCCCGGCCAC
AGCGCGCTGC ACAACAGCCG GTACGACTTC AACGACGAGA TCCTGCCCCT GGGCGCCGCG
CTGCACGCGG GCCTGGTCGA GCAGGCCATG CCGCTGGCAG CGGTCTGA
 
Protein sequence
MAVAAAKPAL SAPPRLRAGG RAFAHIAQFH PELTAFRRDL HAHPELGFEE VYTGSRVKEA 
LKVCGVDEIH DGIGRTGIVA VIHGRSRSSG SMIGLRADMD ALPMSEQNEF TWKSCKPGLM
HGCGHDGHTA MLVGAARYLA ATRHFDGTAV LIFQPGEEGF GGARVMIEDG LFERFPVQSV
YAMHNWPAMQ PGTIGLNSGA MMASADRITI EITGRGGHGA HPYQTVDVVL VAAHIITAVQ
GIVSRNVRPL DSAVISLCAM QAGDLGAFSV LPGTATLVGT VRTFSPAVQE MIEQRLKDLC
SAVALGFGAT ASVRYERIYP ATINTESDAQ FAGDVAVSIV GAENVVRDLE PSMGAEDFSF
MLQSKPGAYL RIGQGTGPGH SALHNSRYDF NDEILPLGAA LHAGLVEQAM PLAAV