| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0934 |
|---|
| Symbol | |
|---|
| ID | 4666135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1015704 |
|---|
| End bp | 1016684 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639822134 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_969306 |
|---|
| Protein GI | 120609628 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCCT TCATTCTGAG ACGCCTCATC CAGGCCGTGA TCGTCATGGT CGCGGTGGCT
TTCATCTCCT TCATGCTGTT CCAGTATGTG GGCGATCCCG TCACCTTCCT GCTCGGGCAG
GACGCCACGC CGGACCAGAT ACGGGACATG CGTGCGGCAC TCGGGCTGGA CCAGCCTTTC
ATCGTGCAGT TCTGGCATTT CCTCGTGAAT GCCGCTCAGG GGGAGTTCGG ACTCAGCCTC
CGGCAGGGGG CCAAGGTGTC CAGCCTCATT GCCGAGCGTT TCCCGGCCAC GCTGGAGCTG
GCGCTGGTCG CCGCTGTCCT GGCCCTGGTG GTCGGCGTGC CCATGGGGGT CTATGCGGCG
CTGCGTCGCG GCACCTTCAC GAGCCAGCTC TTCATGACGC TGTCCCTGCT GGGGGTGTCG
CTGCCCACGT TCCTCATCGG CATCCTGCTG ATCCTCGTGT TCGCCGTCCA CCTGGGCTGG
TTCCCGAGCT TCGGGCGCGG TCCGGTCACG CAGGTCGGCT GGTGGAGCAC GGGCCTGCTC
AGTGCCAAGG GCTGGCACCA CATCACGCTG CCGGCGGTGA CGCTGGCCAT CTTTCAGCTC
ACGCTCATCA TGCGCCTCGT GCGCGCCGAG ATGCTGGAGG TGCTGCGCAC CGACTACATC
AAGTTCGCCC GCGCCCGCGG CCTGTCCGAC CGGGCCATCC ATTTCGGGCA TGCCCTGAAG
AACACGCTGG TGCCGGTGAT GACGATCACC GGCCTGCAAC TGGGCGGCCT CATCGCCTTC
GCCATCATCA CCGAGACGGT GTTCCAGTGG CCCGGCATGG GCCTGCTCTT CATCCAGGCG
GTGACGTTCG CGGACATTCC CGTGATGGCG GCCTACCTCT GCCTGATCGC ACTGATCTTC
GTGGTGATCA ACCTGGTCGT GGACCTGCTG TATTTCGCGG TCGATCCCCG CCTGCGGGTG
GGCAAGGCGG GAGGGCACTG A
|
|---|
| Protein sequence | MLAFILRRLI QAVIVMVAVA FISFMLFQYV GDPVTFLLGQ DATPDQIRDM RAALGLDQPF
IVQFWHFLVN AAQGEFGLSL RQGAKVSSLI AERFPATLEL ALVAAVLALV VGVPMGVYAA
LRRGTFTSQL FMTLSLLGVS LPTFLIGILL ILVFAVHLGW FPSFGRGPVT QVGWWSTGLL
SAKGWHHITL PAVTLAIFQL TLIMRLVRAE MLEVLRTDYI KFARARGLSD RAIHFGHALK
NTLVPVMTIT GLQLGGLIAF AIITETVFQW PGMGLLFIQA VTFADIPVMA AYLCLIALIF
VVINLVVDLL YFAVDPRLRV GKAGGH
|
|---|
| |