| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0933 |
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| Symbol | |
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| ID | 4665921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1014270 |
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| End bp | 1015394 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639822133 |
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| Product | porin |
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| Protein accession | YP_969305 |
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| Protein GI | 120609627 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.760858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTC CGTCTGTGAA AAAAACGGTG GCCATGACCA CCCTGGCAGT AGCGGCTCCC
TTCACGTTCG CGCAGCAGGC CGGCACCAGC AGTGTCCAGC TGTACGGCAT CGTGGACATG
GCGTATCGCC ACACCAACAA CGAAGGCCCC GCCGGAAGTC CGGGCGGCTC GTTGAGCCAG
ATGGTCGGGG GTGGCATGTC CCAGAGCCGT TGGGGCATCA ACGTGACCGA GGACCTGGGT
GGAGGGCTGA AGGCCCTGGT CAACCTGGAA AACCGTTTCG GCGCCGATAC GGGCACGCCG
GCCACGCCGT ACTTCCAGCA ATCCTGGGTG GGCCTGCAGG GCGGCTTCGG CCGTGTCACG
CTGGGCCGCC AATACAACGT TCTCTTCGAC CTGGTGACCA GCACGTACGC GTCCTATCCC
TACTCGCCGT ACATGGACGT CTACAAGCCC GAGATCGGTT TCGCACTGGG CGCGCGGGCC
GACAACATGA TCAAGTACAT GGCCGAGGTC GGTCCATGGC GCGGTGGGTT GCAGTATTCC
TTCGACGAAA AGAGCGCCAC GGGCGGCAAG ACGGCCGGCG GCTACGTGCG CTATGCGTCG
GGCGGCCTGG CGGCGGGCCT GGGCTACCAG CAGTACGAAT TCGCCTCCGG CAAGAAGATC
GACGCCTGGA CCCTGGGTGG TTCCTACCGC ATGGGCAACT GGTACTTCAA CGGCGGCTAT
GGCCAGAACA AGGTGGACGA TGGCCTCACG GCCGTGGACC GTGCCGTTCT GGCCGCGATG
TGGCAGGGCG GCATCAACGG CGGGTTCGGC GGCCCGGCCT TCCTTGCGGC CAACAAGCGC
ACGATCTACA AGATCGGCGC GGGCTACCAG ATCACGCCGC AGATCAACCT GGGCGCGCAC
TACTTCCGTG CGGAGCAGAA GGGCAATACC GATCTCGCCA AGGCCAAGGC CGACTTCTTC
ACCATGGCGC TCGACTATGC ATTCTCCAAG CGGACGGATG CGTACATCGA AGTGGACCAC
ACCAAGCTCA AGGGCGACCA GGTCAGCCTG AACAACGCCG CCGGCCAGCC CAACGGCGCC
AGGTCGCGCA CCGGCTACAC CATCGGCCTG CGGCATCGCT TCTGA
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| Protein sequence | MRIPSVKKTV AMTTLAVAAP FTFAQQAGTS SVQLYGIVDM AYRHTNNEGP AGSPGGSLSQ
MVGGGMSQSR WGINVTEDLG GGLKALVNLE NRFGADTGTP ATPYFQQSWV GLQGGFGRVT
LGRQYNVLFD LVTSTYASYP YSPYMDVYKP EIGFALGARA DNMIKYMAEV GPWRGGLQYS
FDEKSATGGK TAGGYVRYAS GGLAAGLGYQ QYEFASGKKI DAWTLGGSYR MGNWYFNGGY
GQNKVDDGLT AVDRAVLAAM WQGGINGGFG GPAFLAANKR TIYKIGAGYQ ITPQINLGAH
YFRAEQKGNT DLAKAKADFF TMALDYAFSK RTDAYIEVDH TKLKGDQVSL NNAAGQPNGA
RSRTGYTIGL RHRF
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