Gene Aave_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0921 
Symbol 
ID4667017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1004589 
End bp1005662 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content73% 
IMG OID639822121 
Productgeneral secretion pathway protein K 
Protein accessionYP_969293 
Protein GI120609615 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.38459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.677583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGGC GCGGCGGCGG CAGGACGGGC GCCGTGCGCC AGCGCGGGGC GGCGCTCCTC 
GCGGCGATGC TCACCGTGGC GCTGGTGGCC ACTTTCGCGG CTGCGGCGAT GTGGCAGCAA
TGGCGCGCCG TCGAGGTGGA AGCCGCCGAA CGGGCACGCG TGCAGTCGGC ATGGCTGCTG
GTCGGCGCGC TCGACTGGTC GCGGCTGATC CTGCGCGAAG ACCTGTTCGC GCGCGGCGGT
GACGGTACGG ACCACCTCGC GGAACCCTGG GCCGTTCCGC TGGAAGAGGC GCGGCTGTCC
ACCTTCCTCG CGGCCGGGCC CGAAGGCGCG ACGGCCGAGC CGGATGCCAG CACGGACACC
GCCAATGCCT TCCTGTCGGG CCAGATCACC GACCTGCAGT CGCGGCTCAA TGTCTTCAAC
CTGGTCGAGG GCACCGCCTT GTCCGCGCCC GCCCTGCGCC AGTTCGGCCG CCTGTTCGAT
GCGCTGGGGC TGCCGCAGCA GGAGTTGCAG CAGCTCGCGG AAGGCCTGCG CAAGGCGATG
GCGCAGAGCC ATGCCGCGGG AACCGGCAAC CCCGGCACCG GCACCGGAAC TGGCACGGGC
GCCGCGGCAG CGCCCGCCGC CGGACCGGCC GACCTCGCAT CCGTTCCGCT CATGCCCCGC
AGCTTCACGC AGCTCACGTG GCTGGGGCTG TCGGCGTCCA CGGTCGCCGC GCTGGAACCG
TATGCGACCC TGCTGCCGCG GCGCACGCCG GTCAATCTCA ATACCGCGAG CGCGCAGGTG
CTGCAGGCCA GCATCGACGG GCTGGACATG GCGGGCGCGC AGCGGCTGGT GCAGGCGCGG
GAGTCGCAGC ATTTCAAGAC CTCCGCGGAC GCCACCCGGC AACTGGGCGG CAGCCTGCAG
ATCCCGCCCG AGACCCACTC GACCATGTCT TCGTACTACG AAGTGCGGGG ACGCCTGCGC
CTGGGCGACA CCGTCGTGGA GGAGCGCTCG CTGGTGTACA AGGCCGGCTC CACGGCACGC
ACGCTGTGGC GCGAACGCGG CGCGTTCGTG AGGAGCCCCG TTGCCGCACG ATGA
 
Protein sequence
MTRRGGGRTG AVRQRGAALL AAMLTVALVA TFAAAAMWQQ WRAVEVEAAE RARVQSAWLL 
VGALDWSRLI LREDLFARGG DGTDHLAEPW AVPLEEARLS TFLAAGPEGA TAEPDASTDT
ANAFLSGQIT DLQSRLNVFN LVEGTALSAP ALRQFGRLFD ALGLPQQELQ QLAEGLRKAM
AQSHAAGTGN PGTGTGTGTG AAAAPAAGPA DLASVPLMPR SFTQLTWLGL SASTVAALEP
YATLLPRRTP VNLNTASAQV LQASIDGLDM AGAQRLVQAR ESQHFKTSAD ATRQLGGSLQ
IPPETHSTMS SYYEVRGRLR LGDTVVEERS LVYKAGSTAR TLWRERGAFV RSPVAAR