Gene Aave_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0907 
Symbol 
ID4666776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand+ 
Start bp989849 
End bp990490 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID639822107 
Producthypothetical protein 
Protein accessionYP_969279 
Protein GI120609601 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.572934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.591231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG ATTCTGCGCC CATGAACCTG ACGCACCACT TCCTGATCGC CATGCCGGGG 
CTGGAAGACG AGTCGTTTGC CCGCAGCGTC GTGTACCTGT GCGAACACAG CGAGCGCGGC 
GCGCTCGGGC TCATCATCAA CAAGCCGTCC GACCTCAGCC TCAAGGGCCT GTTCGACAAG 
GTGGACCTGT CGCTGCGGCG CGAAGACCTG TCGCTCGAAC CGGTGTTCCG CGGCGGCCCG 
GTCCAGACGG AGCGCGGCTT CGTGTTGCAC GAGGCCATGG GCCCATCCTC CGGAAAGCAA 
GCCGCGGGCG AAGGCGGCGC GCAGGCCGAA GGCGAGGGCG CGGAAGAGTC CGCCTACGCC 
TCCACCATGT CCATTCCCGG CGGTCTCGAG ATGACCACGA GCAAGGACGT GCTCGAGGCC 
CTGTCCACCG GCGCCGGTCC GCGGCGCGTG CTGGTGACCC TCGGCTATTC CTCGTGGGGC 
GAAGGCCAGC TCGAGTCCGA GCTGGCCGAG AACAGCTGGC TCACCGTGGG CGCCGACCTG 
TCCGTGATCT TCGACACCCC CGTGGGCCAG CGTTACGACC GGGCCCTCGC CCTGCTGGGG 
CTGCAGTCCT GGATGCTCTC GCCCGAGGCG GGCCACGCAT GA
 
Protein sequence
MPADSAPMNL THHFLIAMPG LEDESFARSV VYLCEHSERG ALGLIINKPS DLSLKGLFDK 
VDLSLRREDL SLEPVFRGGP VQTERGFVLH EAMGPSSGKQ AAGEGGAQAE GEGAEESAYA 
STMSIPGGLE MTTSKDVLEA LSTGAGPRRV LVTLGYSSWG EGQLESELAE NSWLTVGADL 
SVIFDTPVGQ RYDRALALLG LQSWMLSPEA GHA