Gene Aave_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0901 
Symbol 
ID4666428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp978174 
End bp978584 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID639822101 
Productresponse regulator receiver protein 
Protein accessionYP_969273 
Protein GI120609595 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.850584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAAT TGACCCAGAC CAGTGGCGCA ACCTTCAAGG TGCTTGTCGT GGACGACAGC 
AACACCATCC GCCGGAGTGC CGAGATCTTT CTCAAGCAGG GAGGCCACGA GGTCCTGCTG
GCGGACGATG GCTTCGACGC CCTGGCGAAG GTCAATGATT ATCAACCCCA GTTGATTTTC
TGCGACATCC TGATGCCGAA ACTGGACGGC TACCAGACCT GCGCCATCAT CAAGCGCAAT
GCGCGCTTCG CGGACACGCC CGTTGTCATG CTCTCGTCAA AAGACGGGGT ATTCGACAAG
GCGCGCGGCC GCATGGTGGG CTGCCAGGAA TATCTCACCA AACCATTTAC CAAAGACCAG
CTGCTGAAAG CGGTTCAGCA GTTCGGTAAT GCCCAACAAG GAGCGATGTA A
 
Protein sequence
MTKLTQTSGA TFKVLVVDDS NTIRRSAEIF LKQGGHEVLL ADDGFDALAK VNDYQPQLIF 
CDILMPKLDG YQTCAIIKRN ARFADTPVVM LSSKDGVFDK ARGRMVGCQE YLTKPFTKDQ
LLKAVQQFGN AQQGAM