| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0893 |
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| Symbol | |
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| ID | 4666887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 969978 |
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| End bp | 971252 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822093 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_969265 |
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| Protein GI | 120609587 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.294746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.440044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTTG GCAAATTCTG GGGTTCGCTG CAAACGCAGG GGGGCGGGCG TTTTTCCAAC
ACGGAGGCGT TCTCTCCGAG CGAGGCCTTT TCCGAATTCG GCGAATCCGC GCAATTCCGC
GGCTCGGACC TGCAGGCCGC GCGCATCCTC GAGCGCCGGC TGGGCCGCCC TTACCGGCGG
ATGGTGCCCG TGTTCCTGTG CGGGCTCTAC CTGGTGTGCA CGCTGGCGTT CTATGCGCTG
GGCATGGTGT CCGGGCCCCT GGTGCTCATG GTGGCGGCGC TGATCGCCTG CGGCATCGCG
CTGGGCACGG CCTACATGCG TTTCGGGCAG CCGGGGGAAG CGCTGGAGCC GGCACGCATG
CGCGACCGGC AACTGCGCTT GCCGATCGTG GTGGCGTCCG CGTCCACCCT GCTGCTCGTC
TTCTACCTGG AGCCCGTCAC GCAGATCGCG CTGGCGCCGT TCCTGTTCGT CGCCATGTCG
TACGGGCTGC TCACGCTGTC GCGCCGCACG GCCCTGCTGC TGTGCGGCGG CATCCTGGCC
GGCTATGCGC TGGTGATGGG GCTGCACTAT GCCGAGCGCG AAGACGGTGT GCTGCTGCGC
CTGGAGGCCC TGCATTTCGT GGCGCTCGCG CTGGCCCTGC CGGCCTATGT CCTGCTGATG
GGCCGCGTGC GGCTGCTGCA CCGGCTGCTG CAGAAGACCA GCAGCGAGAT GAAGTCCATC
GCGGAGAGCG CGCGCCTGGA TGCGCTCGGC TGCCTGAACC GCCGCTCGAT CCTCGCCGCG
CTGGAAGAGC AGAAGCAGCT GGCCGACGAG AGCGGCATCC CGCTGTGCCT GGCGGTGGTG
GACCTCGACC ATTTCAAGCG CATCAACGAT GAAATGGGCC ACCTGTGCGG CGACGAGGTG
CTGCGCACCT TCTCGCAGCT GGCCCAGCAG ATCGTGCGCG GCGACGATTT CTTCGGCCGC
TACGGTGGGG AGGAGTTTCT GCTGATCTTC CCGGCCACGC CCCTGCTGCC CGCGCTCAAT
ACCTGCGAGC GCATCCGCTC GCAGGTGGAG TCGCACGACT GGAAGGAGCC GCTGCGCGGG
CGCGTCACGG TCTCGGTCGG CGTCACGCAG TACGTGCTGG GCGAATCCGT GCTGGAGTTC
TTCTCGCGCG CCGACACCGC CATGTACCTC GCCAAGCAGG GCGGGCGCAA CCAGGTGGTG
GTGCAGGAGC CCGTGGGCGC CTTCGCCCCG ACCGAGGCCG GCGAGCCGCA GGTGCCGGCG
CACGGCTATT TCTGA
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| Protein sequence | MGLGKFWGSL QTQGGGRFSN TEAFSPSEAF SEFGESAQFR GSDLQAARIL ERRLGRPYRR
MVPVFLCGLY LVCTLAFYAL GMVSGPLVLM VAALIACGIA LGTAYMRFGQ PGEALEPARM
RDRQLRLPIV VASASTLLLV FYLEPVTQIA LAPFLFVAMS YGLLTLSRRT ALLLCGGILA
GYALVMGLHY AEREDGVLLR LEALHFVALA LALPAYVLLM GRVRLLHRLL QKTSSEMKSI
AESARLDALG CLNRRSILAA LEEQKQLADE SGIPLCLAVV DLDHFKRIND EMGHLCGDEV
LRTFSQLAQQ IVRGDDFFGR YGGEEFLLIF PATPLLPALN TCERIRSQVE SHDWKEPLRG
RVTVSVGVTQ YVLGESVLEF FSRADTAMYL AKQGGRNQVV VQEPVGAFAP TEAGEPQVPA
HGYF
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