| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0878 |
|---|
| Symbol | |
|---|
| ID | 4667926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 954873 |
|---|
| End bp | 956009 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639822078 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_969250 |
|---|
| Protein GI | 120609572 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.213528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.403321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAT CCCGCAACGA ACCCGTCCAA TTCGCCTACT GGGTGCCGAA CGTCAGCGGC
GGCCTGGTCG TGAGCACCAT CGAGCAGCGC ACCGACTGGA GCCTGGAATA CAACCAGCGG
CTGGCGGTGG CGGCGGAGAA AGCCGGCTTC GAATACGCCC TGAGCCAGAT CCGCTTCACG
GCGGGCTACG GGGCGGAGCA CCAGCACGAG TCCGTGTCGT TCAGCCAGGC CCTGCTGCAC
GCCACCACGC GGCTGAAGGT GCTGGCCGCC ATCCTGCCGG GCCCGTGGAA CCCGGCCGTG
GTGGCCAAGC AGATCGCCAC CATCGACCAC ATCTCGGGCG GCCGCATCGG CATCAACGTG
GTGAGCGGCT GGTTCAAGGG CGAGTTCCAG GCCATCGGCG AGCCCTGGCT GGAGCACGAC
GAACGCTACC GCCGCTCCAA TGAATTCATC CGCGCGCTCA AGGGCATCTG GACGCAGGAC
CGCTTCACCT TCAAGGGCGA CTTCTACCGC TTCAACGACT ACACCCTCAG CCCCAAGCCG
CTGCAGAAGC CCCATCCGGA GATCTTCCAG GGCGGCAGCT CGCGCGCCGC ACGCGACAAC
GCGGCCAGCG TGTCCGACTG GTACTTCACC AACGGCAACA CCCCCGAGAA CCTGAAGGCC
CAGATCGACG ACATCCAGGC CAAGGCCCGG GCCAACGGCC ACACGGTGCG CATCGGGGTG
AACGCCTTCG TGATCGCCCG CGACACCGAG GAAGAGGCGC AGGCCGTGCT GCAGGACATC
ATCCGCCATG CGCACGTGGA AGCGGTGCAT GCCTTCGGGG ACGCCGTGAA GCAGGCCGGC
CGCGCTTCCC CGGAAGGCGA AGGCAACTGG GCGAAGTCCA CCTTCGAGGA CCTCGTGCAA
TACAACGACG GCTTCCGCAC CAACCTGATC GGCACGCCGC GGCAGATCGC CGAGCGCATC
GTCGCGCTCA AGGCCATCGG CGTGGACCTG GTGCTGACCG GCTTCCTGCA CTTCATCGAA
GAGGTGGAGT ACTTCGGCCG CGAGGTGCTG CCGCTGGTGC GCGAACTGGA GGCGCGCCAG
GCCTCGGCCC AGCCGCAGTC CCGGCCGCAG CCCGCCCTGG AGGCGGAGGC GGCCTGA
|
|---|
| Protein sequence | MSTSRNEPVQ FAYWVPNVSG GLVVSTIEQR TDWSLEYNQR LAVAAEKAGF EYALSQIRFT
AGYGAEHQHE SVSFSQALLH ATTRLKVLAA ILPGPWNPAV VAKQIATIDH ISGGRIGINV
VSGWFKGEFQ AIGEPWLEHD ERYRRSNEFI RALKGIWTQD RFTFKGDFYR FNDYTLSPKP
LQKPHPEIFQ GGSSRAARDN AASVSDWYFT NGNTPENLKA QIDDIQAKAR ANGHTVRIGV
NAFVIARDTE EEAQAVLQDI IRHAHVEAVH AFGDAVKQAG RASPEGEGNW AKSTFEDLVQ
YNDGFRTNLI GTPRQIAERI VALKAIGVDL VLTGFLHFIE EVEYFGREVL PLVRELEARQ
ASAQPQSRPQ PALEAEAA
|
|---|
| |