| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0870 |
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| Symbol | |
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| ID | 4667665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 943753 |
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| End bp | 945132 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639822069 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_969242 |
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| Protein GI | 120609564 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.414997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.124166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG CCCTCACCGA AAAACTCTCC CGGCTCGTCA AGGAGATGCG AGGCCAGGCC
CGCATCACCG AATCCAACGT GCAGGACATG CTGCGCGAGG TGCGCATGGC GCTGCTGGAG
GCCGACGTGG CCCTGCCGGT GGTGCGCGAC TTCATCGCGC GCGTGAAGGA AAAGGCCCTG
GGCCAGGAGG TGCTGGGCTC GCTCAAGCCG GGGCAGACCC TGGTCTCCAT CGTGAACCGC
GAACTGGCCG CGACCATGGG CGAGGGCGTC TCGGACATCA ACCTCGCCGC CCAGCCCCCG
GCCGTGATCC TGATGGCGGG CCTGCAGGGC GCCGGCAAGA CGACGACCAC GGCCAAGCTG
GCCAAGCACC TGATCGAGAA GCGCAAGAAG AAGGTGCTCA CCGTCTCCGG CGACGTGTAC
CGCCCGGCCG CCATCGAGCA GCTCAAGACG GTGACGAAGC AGGCGGGTGC CGAATGGTTT
CCCAGCACGC CCGAGCAGAA GCCCCTGGAC ATCGCGCGCG CCGCGATCGA CCACGCCCGC
CGCCACTATT TCGACGTGCT GCTGGTCGAT ACGGCCGGCC GCCTCGCGAT CGACGAGGCG
CTCATGAACG AGATCAAGGA GCTGCACGCG GCGCTGAACC CGGTCGAGAC GCTGTTCGTG
GTCGATGCCA TGCAGGGCCA GGACGCGGTC AACACGGCCA AGGCCTTCAA GGAGGCGCTG
CCGCTCACCG GCATCGTGCT GACCAAGCTC GACGGCGATT CCCGCGGCGG CGCGGCCCTG
TCGGTGCGGC AGGTGACGGG CGCTCCGATC AAGTTCGCCG GTGTGTCCGA GAAGATCGAC
GGCCTGGAAG TGTTCGACGC CGAACGCCAT GCAGGCCGCG TGCTGGGCAT GGGCGACATC
GTGGCCCTGG TGGAGCAGGT GAGCGCGGGC GTCGACCTGG AGGCCGCGCA GAAGCTGGCC
GCCAAGGTCA AGAGCGGCGA CGGCTTCGAC CTGAACGACT TCCTCGGCCA GCTGCAGCAG
ATGAAGCAGA TGGGCGGCAT CTCCAGCCTC ATGGACAAGC TGCCCTCCGA ATTGATGGCC
AAGGCCGGCC AGGTGGACAT GAACAAGGCC GAGAAGGACA TCCGCCGCAA GGAAGGCATC
ATCCAGAGCA TGACGCCCCA GGAGCGCCGC AAGCCCGAGA TCATCAAGGC CACGCGAAAG
AAGCGCATCG CGGCCGGGGC GGGCGTGCAG GTGCAGGAGG TGAACCGCCT GCTCAACGAG
TTCGACCAGA TGCAGGGCAT GATGAAGAAG ATGAAGGGCG GCGGCCTCAT GAAGATGATG
AAGAAGATGG GCGGCATGAA GGGCTTCGGC GGGGGCGGCA TGCCCAAGCT GCCGTTCTGA
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| Protein sequence | MASALTEKLS RLVKEMRGQA RITESNVQDM LREVRMALLE ADVALPVVRD FIARVKEKAL
GQEVLGSLKP GQTLVSIVNR ELAATMGEGV SDINLAAQPP AVILMAGLQG AGKTTTTAKL
AKHLIEKRKK KVLTVSGDVY RPAAIEQLKT VTKQAGAEWF PSTPEQKPLD IARAAIDHAR
RHYFDVLLVD TAGRLAIDEA LMNEIKELHA ALNPVETLFV VDAMQGQDAV NTAKAFKEAL
PLTGIVLTKL DGDSRGGAAL SVRQVTGAPI KFAGVSEKID GLEVFDAERH AGRVLGMGDI
VALVEQVSAG VDLEAAQKLA AKVKSGDGFD LNDFLGQLQQ MKQMGGISSL MDKLPSELMA
KAGQVDMNKA EKDIRRKEGI IQSMTPQERR KPEIIKATRK KRIAAGAGVQ VQEVNRLLNE
FDQMQGMMKK MKGGGLMKMM KKMGGMKGFG GGGMPKLPF
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