| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0848 |
|---|
| Symbol | |
|---|
| ID | 4667105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 918888 |
|---|
| End bp | 919298 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639822047 |
|---|
| Product | putative TIS1421-transposase orfA protein |
|---|
| Protein accession | YP_969220 |
|---|
| Protein GI | 120609542 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.120469 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAA GACCCGTCAG CAAAGAACTG TGGCGACAGC TGCAACCCCT CATTCCGGCC
TTCGTGCCAT CGGCCAAGGG TGGAGCGCGC AAGCGTACCG TGAGCGATGA GGCGGCCCTC
AATGGCATCC TGTTCGTGCT GCACACGGGC ATCGCCTGGG AAGATCTGCC GCAATCCCTG
GGCTATGGCA GCGGCATGAC GTGCTGGCGA CGGCTGCGAG ACTGGAACGC TGCCGGGGTA
TGGCAGAAGC TGCACCACGC CATGCTGGTA CGCCTGCGCG AACACGACCA GATCGATTGG
AGCCGGGCGA GCATCGATGG CTCGTCGGTG CCAAGCCCCC GGGGGGCCAG GAAACGGGCC
CCAACCCTAC GGACAGGGGC AAACTCGGCT CCAAGCGGCA CATCGTCGTA G
|
|---|
| Protein sequence | MARRPVSKEL WRQLQPLIPA FVPSAKGGAR KRTVSDEAAL NGILFVLHTG IAWEDLPQSL
GYGSGMTCWR RLRDWNAAGV WQKLHHAMLV RLREHDQIDW SRASIDGSSV PSPRGARKRA
PTLRTGANSA PSGTSS
|
|---|
| |