Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0846 |
Symbol | |
ID | 4667782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 917304 |
End bp | 918464 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822045 |
Product | rod shape-determining protein RodA |
Protein accession | YP_969218 |
Protein GI | 120609540 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0813507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCG TTTTCGACAA GCCTTCCCTG CCGCAGCGCA TCCTGCCCCT GTTCCGCGGC TTCGACTGGC CGCTCATCGC GGTGCTGCTG CTGCTGTCGT CGATCGGCCT GGTGGCGATG TACTCCTCGG GCTACGACCA CGGCACCCGG TTCTACGACC ACGGCCGCAA CATGCTGCTG GCCGCGGGCA TCCTGTTCGC CGTCGCGCAG ATCCCGCCGC AGCGGCTCAT GATGCTGGCG GTGCCGCTCT ACACCGCCGG CGTGGCGCTG CTGGTGGCGG TGGCGCTCTT CGGCATCATC AAGAAGGGCG CGCAGCGCTG GATCAACGTG GGCATCGTGA TCCAGCCGAG CGAGATCCTC AAGATCGCGA TGCCGCTCAT GCTGGCCTGG TGGTTCCAGA AGCGCGAAGG GCAGTTGCGC CCGCTGGACT TCGTGGTGGC CGGCGTGCTG CTCGCCGTGC CCGTGGGCCT CATCATGAAG CAGCCCGACC TGGGCACCTC GCTGCTGGTG CTCGCGGCCG GGCTGTCGGT GATCTTCTTC GCCGGATTGC CCTGGAAGCT CGTGCTGCCC CCGGTGATCC TGGGCGGCAT CGGCATCGCG CTCATCGTGT GGTTCGAGCC GCAGCTCTGC GCGGACGGCG TGCGCTGGCC GGTGCTGCAC GACTACCAGC AGCAGCGCAT CTGCACGCTG CTCGACCCCA CGCGCGACCC GCTGGGCAAG GGGTTCCACA TCATCCAGGG CATGATCGCC ATCGGCTCGG GCGGTGTCTG GGGCAAGGGC TTCATGGCCG GCACGCAGAC CCACCTGGAA TTCATCCCCG AGCGCACCAC CGACTTCATC TTCGCGGCCT ATTCCGAGGA GTTCGGCCTG GTGGGCAACC TGTTCCTGAT CGTCAGCCTG CTGCTGCTCG TCTGGCGCGG GCTGGCGATC GCGCTGGGCG CGACGACGCT GTTCTCGCGC CTCATGGCCG GTGCCGTGTC GATGATCTTC TTCACCTACG CCTTCGTGAA CATGGGCATG GTGAGCGGCA TCCTGCCCGT GGTGGGCGTG CCGCTGCCCT TCGTGAGCTA CGGCGGCACC GCGATGGTCA CGCTGGGGCT GGCGCTGGGG GTGCTGATGT CCATCGCCCG CGCGCAGCGG CAGCCGCTGG CCCCGGCCTG A
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Protein sequence | MSAVFDKPSL PQRILPLFRG FDWPLIAVLL LLSSIGLVAM YSSGYDHGTR FYDHGRNMLL AAGILFAVAQ IPPQRLMMLA VPLYTAGVAL LVAVALFGII KKGAQRWINV GIVIQPSEIL KIAMPLMLAW WFQKREGQLR PLDFVVAGVL LAVPVGLIMK QPDLGTSLLV LAAGLSVIFF AGLPWKLVLP PVILGGIGIA LIVWFEPQLC ADGVRWPVLH DYQQQRICTL LDPTRDPLGK GFHIIQGMIA IGSGGVWGKG FMAGTQTHLE FIPERTTDFI FAAYSEEFGL VGNLFLIVSL LLLVWRGLAI ALGATTLFSR LMAGAVSMIF FTYAFVNMGM VSGILPVVGV PLPFVSYGGT AMVTLGLALG VLMSIARAQR QPLAPA
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