Gene Aave_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0832 
Symbol 
ID4668162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp903748 
End bp904251 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content74% 
IMG OID639822031 
Productintegral membrane protein 
Protein accessionYP_969204 
Protein GI120609526 
COG category[S] Function unknown 
COG ID[COG5455] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.147282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTA CAGACTCTTC TTGCGCCGGT GCATCCGGCC CAGGCGCGCT GAACCACTTG 
CGCTCCGCCG GCCTGGCCCT GTTCCTCGGC CTGTCCTCCC TGGGCGCGCA GGCCCAGCCC
TACGACGGCA TCCCGGGCCG CGAGCACGGG CACGGCCACG GGCACCGCAA GGGCGGTCCG
GGCCATGGCC CCCACGGTCA CCATGCCGGC CCGCGCCATG CGCCGCCGCC CCCGCCGCAC
TGGCACCATG CCGCCCCGCG CCACCATCCC GGCCCTCCGC CGCACGCCCG CGCCCACGGA
CGCCGTGGTG CCGGCCCGCA CCATGACTGG TACCGCGGCG GCCGGGTGCC GCCCATGTAC
CGCTCCCACC ATTACGTGGT GCAGGACTGG CGCGTCCACC ACCTCGCCCC GCCGCCCCAT
GGGTATCACT GGGTACAGAA CGGTCCCGAC TACCTGCTGA TCTCGGTGGG CTCCGGCGTC
ATCGCGCAGA TCGTCTTCCG GTAG
 
Protein sequence
MIRTDSSCAG ASGPGALNHL RSAGLALFLG LSSLGAQAQP YDGIPGREHG HGHGHRKGGP 
GHGPHGHHAG PRHAPPPPPH WHHAAPRHHP GPPPHARAHG RRGAGPHHDW YRGGRVPPMY
RSHHYVVQDW RVHHLAPPPH GYHWVQNGPD YLLISVGSGV IAQIVFR