| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0827 |
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| Symbol | lpxC |
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| ID | 4668143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 896685 |
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| End bp | 897608 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639822026 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_969199 |
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| Protein GI | 120609521 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.354252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.556999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCAGC AACGCACGAT CAAGACCCTC ACCCGCGCCG TCGGCGTGGG CCTGCACAGT
GGCCAGCGGG TCGAGCTCAC GTTGCGTCCC GCCGCGCCGG ATACGGGCAT CGTGTTCCGC
CGCGTCGATC TGCCCGAACC CGTGGACATC CCGATCCGGG CCGAATCCGT CGTGGATACG
CGCATGGCCT CCACCATCGG CGTGGGCGGT GCCAAGGTGC ATACGGTCGA GCATTTGATG
TCGGCCTGCG CGGGCCTGGG GCTGGACAAC CTCTACATCG ACATCACGGC CGAGGAGGTG
CCCATCCTCG ACGGCTCGTC GGCCTCCTTC GTGTTCCTGC TGCAGAGCGC CGGCGTGGTG
CTGCAGAACG CGCCCAAGAA GTTCATCCGC GTCACGCGTC CCGTCGAGGT GCGCGAGGGC
GAGGGCCAGC AGCTCAAGTG GGCGCGGCTG GAGCCCTACC ACGGCTACAA GCTGCGCTTC
GAGATCGACT TCGCCCACCC TGCGGTGGAT TCCACCGGCC AGAGCGTCGA GTTCGATCTC
GGCTCGGGCA ACTACACGCG CGACATCGCG CGTGCCCGCA CCTTCGGCTT CACGAAGGAC
GTGGAGATGA TGCGCGCGAG CGGCCTGGCC CTGGGCGGCG GGTTGGACAA CGCCATCGTC
ATGGACGACT ACAAGGTGCT CAATGCCGAC GGCCTGCGCT ACGACGACGA GTTCGTGAAG
CACAAGATCC TCGACGCCAT CGGTGATCTC TACATCGTCG GCCGGCCGCT GCTGGCGGCC
TACAGCGCGT TCCGTTCGGG CCACGCGATG AACAACCGGC TGCTGCGCGA ACTGCTGGCC
CACGAGGACG CGTGGGAGAT CGCCACGTTC GAGAGCGAGC GGCAGGCACC CAGCGGGTTC
GCCGCCCCCG TGCAGGCCTG GTGA
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| Protein sequence | MLQQRTIKTL TRAVGVGLHS GQRVELTLRP AAPDTGIVFR RVDLPEPVDI PIRAESVVDT
RMASTIGVGG AKVHTVEHLM SACAGLGLDN LYIDITAEEV PILDGSSASF VFLLQSAGVV
LQNAPKKFIR VTRPVEVREG EGQQLKWARL EPYHGYKLRF EIDFAHPAVD STGQSVEFDL
GSGNYTRDIA RARTFGFTKD VEMMRASGLA LGGGLDNAIV MDDYKVLNAD GLRYDDEFVK
HKILDAIGDL YIVGRPLLAA YSAFRSGHAM NNRLLRELLA HEDAWEIATF ESERQAPSGF
AAPVQAW
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