Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0823 |
Symbol | ddl |
ID | 4668635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 891866 |
End bp | 892870 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639822022 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_969195 |
Protein GI | 120609517 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.595745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCGG GCTTACCTGA AACCGAAATC GACGTGCGGG CGCTGGGCAA GGTGGCCGTG CTGATGGGCG GCGACTCCGC CGAGCGGGAG GTTTCGCTCA TGTCCGGCGG CGGCGTGCTG CAGGCGCTGC GTGCGCGCGG CGTGGACGCG CATGCCTTCG ATCCGTCCCA GTCCGACCTG TCGGAGCTCA AGAGCCACGG CTACGCGCGC TGCTTCATCG CACTGCACGG CCGGCATGGC GAGGACGGCA CCGTGCAGGG CGCGCTGGAG TTGCTGGGCA TTCCCTATAC CGGACCGGGC GTGATGGCGT CGGCCATCGC CATGGACAAG ATCATGACCA AGCGCATCTG GCGCTTCGAG GGCCTGCCCA CGCCGGACTG GCGGCTGGTG TCGAGTGCTG CCGAGACCGC GCAGGCGCTG GAGGACCTGG GCTCGCCCAT GATCGTCAAG CCCTCGCGCG AAGGCTCCAC CATCGGACTG ACCAAGGTCA CCTCGCCCGG ACAGTGCGAG CAGGCCTACC GCCTGGCCTC GCGCTACGAC CCCGAGGTGC TGTGCGAGCA ATTCATCGAG GGCGAGGAAA CCACCTGCCC CGTGCTGGGC CAGGGCGCGG GCGCGCATGC GCTGCCGGTG ATCCGTATCG TGGCGCCCGA GGGCAACTAC GACTACCAGA ACAAGTACTT CACCGACGTC ACGCAGTACC ACTGCCCCTG CGGCCTGCCC GAGCAGGAGG AGCGCGAGAT CCAGCGCCTG GTGGTGGAGG CGTTCCGCAC GCTGCAGTGC CGCGGCTGGG CCCGCGCCGA CATCATGATC CGCGCGAGCG ACCGCAAGCC CTTCCTGCTG GAGATCAACA CCTCCCCCGG CATGACCGGC CATTCGCTGG TACCCATGTC GGCGCGCGCC ATGGGCGTGA GCTACGAGGA ACTGTGCCTG CGCATCCTGG CGGGGGCGTC GCTCGACGCG CGCCAGGGCC AGGTGGACGC CGCAGGGCAT CCGGGAGCCG CATGA
|
Protein sequence | MAAGLPETEI DVRALGKVAV LMGGDSAERE VSLMSGGGVL QALRARGVDA HAFDPSQSDL SELKSHGYAR CFIALHGRHG EDGTVQGALE LLGIPYTGPG VMASAIAMDK IMTKRIWRFE GLPTPDWRLV SSAAETAQAL EDLGSPMIVK PSREGSTIGL TKVTSPGQCE QAYRLASRYD PEVLCEQFIE GEETTCPVLG QGAGAHALPV IRIVAPEGNY DYQNKYFTDV TQYHCPCGLP EQEEREIQRL VVEAFRTLQC RGWARADIMI RASDRKPFLL EINTSPGMTG HSLVPMSARA MGVSYEELCL RILAGASLDA RQGQVDAAGH PGAA
|
| |