| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0799 |
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| Symbol | dapF |
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| ID | 4669737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 860960 |
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| End bp | 861838 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639821998 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_969171 |
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| Protein GI | 120609493 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCC GCTTCACCAA AATGCAGGGC GCCGGCAACG ATTTCGTCGT GCTCGACGAA
ACGCAGGGGC GCCTGGGCCT CACGCCCGCG CAGTACCGCT ACCTCGCCGA CCGCCACTTC
GGGGTGGGGG CCGACCAGAT CCTCACCGTG CGTCCGTCGC CGGCCGAGGG CATCGATTTC
GAATACGTCA TCCACAACGC CGACGGCGGC GAGGTCGAGC AGTGCGGCAA CGGCGCGCGC
TGCTTCGCCC GCTACGTGCG CGACAAGGGC CTCACCGACC GCGACACCAT CCGCGTGCAG
ACCCTGGCCG GCGTGATCGC CCCGCGCCTG ACGCCGGACG GCCGCGTCAC CGTGGACATG
GGCCGCCCGC GCTTCGACCC CGCGGAGGTG CCTTTCGACG CCTCCGGCCT CGCACCCGCG
GCCCGTGGGG CGGGGCAGAC GTGGCCCCTG GCCCTCGGAG CCGGCGCCGA TGCGCAGGTG
GTCGATGTGG CGGTGGTGTC CATGGGCAAC CCGCATGCCG TGCAGCTGGT CGGCGACGTG
GACGCGGCGC CGGTGGCGCA CACCGGCCCG CTCATCGAGG GCCACGCGCG CTTCCCGCAG
CGCGTGAACG CAGGCTACCT GCAGATCGAG GACCGGGCCC GCGTGCGGCT GCGCGTGTAT
GAACGCGGTG CCGGCGAAAC CCTGGCCTGC GGCACGGGCG CCTGCGCGGC CGTGGCCGCG
GGCATCCGCC TGGGCCTGCT GGACGCGCGC GTCGATGTCC GCACGCGCGG CGGCCTTCTC
ACCATCGCCT GGAGCGGCGA CCCGTCCGAG TCCGTCTTCA TGACCGGCCC GGCCACCACC
GTCTTCGAAG GCCAGATCGA CATTCCCGAC GCACCATGA
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| Protein sequence | MQIRFTKMQG AGNDFVVLDE TQGRLGLTPA QYRYLADRHF GVGADQILTV RPSPAEGIDF
EYVIHNADGG EVEQCGNGAR CFARYVRDKG LTDRDTIRVQ TLAGVIAPRL TPDGRVTVDM
GRPRFDPAEV PFDASGLAPA ARGAGQTWPL ALGAGADAQV VDVAVVSMGN PHAVQLVGDV
DAAPVAHTGP LIEGHARFPQ RVNAGYLQIE DRARVRLRVY ERGAGETLAC GTGACAAVAA
GIRLGLLDAR VDVRTRGGLL TIAWSGDPSE SVFMTGPATT VFEGQIDIPD AP
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