| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0792 |
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| Symbol | |
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| ID | 4669710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 853172 |
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| End bp | 853975 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639821991 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_969164 |
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| Protein GI | 120609486 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.543217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGATC TTTCCCCCGA TGGCACCGGC GCCGGAGAAG CCGGCCACAT CCGCCTGTCG
AAGCGCGTCG CCGAGATGCG CGGCTGCTCC CGCCGCGAGG CCGAGTGGCT CATCGAAGGC
GGCTGGGTGC AGGTGGACGG GCGGATGACC GAGGCGCCGG GCGCCCGTGT CCGCCCGGAC
CAGGACGTCG TGGTCGCGCA GAACGCCAAG GCCGAGGAGG CGCCGCCCGT CACCCTCCTG
CTGCACAAGC CCGCCGGCTG GGAGGCCGGC ATCGGCCACG GCCCCGCCGG CGATCCGCGC
CAGGCGCGCA GCGGCGGGGC TCCCGACGCC GGCACGCTGC TGGAGCCCGG CCGCCGGTAC
GTGGGCGACA GCCCGCCCGT GCGGGTGCTG CAGCGGCATT TCAGGCAGCA GGAGTGCTTC
ACGCCGCTGG CCGACGCGGC CAGCGGGCTC GTGGTCTATA CGCAGGACCG GCGCATGGCG
CGCCGCCTGG CCGAAGACAT CGAACTGCTC GAACAGGAAT GCATCGCCAC GGTGGACGGC
CGCATCGCCG AGGGCGGCCT CGAACGGCTC TGCCGGGGGC TGGAGTTCAA CGGCCGGCCC
CTGCCGCCGG CCAAGGTGAG CTGGCAGAGC GAGACGCGGC TGCGCTTCGC GCTCAAGGGC
ATCCGCCCGG GGCAGATCCC CGCGATGTGC GAGGCCGTCG GCCTGCAGGT GACGGCGCTC
AAGCGGCTGC GCATCGGCCG CGTCTCGCTC GCCAGGGTGC CCGAAGGGCA GTGGCGCTAC
CTGCTGCCCT GGGAGCGCTT CTGA
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| Protein sequence | MHDLSPDGTG AGEAGHIRLS KRVAEMRGCS RREAEWLIEG GWVQVDGRMT EAPGARVRPD
QDVVVAQNAK AEEAPPVTLL LHKPAGWEAG IGHGPAGDPR QARSGGAPDA GTLLEPGRRY
VGDSPPVRVL QRHFRQQECF TPLADAASGL VVYTQDRRMA RRLAEDIELL EQECIATVDG
RIAEGGLERL CRGLEFNGRP LPPAKVSWQS ETRLRFALKG IRPGQIPAMC EAVGLQVTAL
KRLRIGRVSL ARVPEGQWRY LLPWERF
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