Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0786 |
Symbol | |
ID | 4669685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 844559 |
End bp | 845350 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639821985 |
Product | ABC transporter-related protein |
Protein accession | YP_969158 |
Protein GI | 120609480 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.545872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTC CCAGCAAGAA GACCGGCGAC GTGATCCTCG ACGTGCGCAA CATCAGCCTG CGCTTCGGCG GGGTGAAGGC GCTCACCGAC ATCTCGTTCG ACGTGCGCGA GCACGAGATC CGCTCCATCA TCGGCCCGAA CGGCGCCGGC AAGAGCTCGA TGCTCAACTG CATCAACGGC GTCTATGCGC CGCAGGAAGG TTCCATCACC TTCCGGGGCA AGACCTTCGC CCACATGAAT TCGCGCCAGG TGGCCGAGAT GGGCGTGGCG CGCACCTTCC AGAACCTGGC GCTGTTCAAG GGCATGAGCG TGCTGGACAA CATCATGTCC GGCCGCAACC TGAAGATCCG GAGCAACCTG CTGATGCAGG CCCTGCGCCT GGGGCCGGCG GTGGCCGAGG AGATCCGCCA CCGCGAAGTG GTCGAGCGCA TCATCGATTT CCTGGAGATC CAGGCCTGGC GCAAGGCGCC CGTGGGCCAA TTGCCCTACG GCCTGCAAAA GCGCGTGGAC CTGGGACGGG CCCTGGCCAT GGAGCCGCAG GTGCTGCTGC TCGACGAGCC CATGGCGGGC ATGAACGTGG AAGAGAAGCA GGACATGTGC CGCTTCATCC TCGACGTGAA CGACGAGTTC GGCACCACCA TCGTGCTGAT CGAGCACGAC ATGGGCGTGG TGATGGACAT CTCCGACCGT GTCGTGGTGC TGGACTACGG CAAGAAGATC GGCGACGGCA CGCCGCAAGC GGTGCGCGAG AACGAAGACG TCATCCGCGC CTACCTCGGC GCCGGCCACT AG
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Protein sequence | MTTPSKKTGD VILDVRNISL RFGGVKALTD ISFDVREHEI RSIIGPNGAG KSSMLNCING VYAPQEGSIT FRGKTFAHMN SRQVAEMGVA RTFQNLALFK GMSVLDNIMS GRNLKIRSNL LMQALRLGPA VAEEIRHREV VERIIDFLEI QAWRKAPVGQ LPYGLQKRVD LGRALAMEPQ VLLLDEPMAG MNVEEKQDMC RFILDVNDEF GTTIVLIEHD MGVVMDISDR VVVLDYGKKI GDGTPQAVRE NEDVIRAYLG AGH
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