Gene Aave_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0786 
Symbol 
ID4669685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp844559 
End bp845350 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID639821985 
ProductABC transporter-related protein 
Protein accessionYP_969158 
Protein GI120609480 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.545872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTC CCAGCAAGAA GACCGGCGAC GTGATCCTCG ACGTGCGCAA CATCAGCCTG 
CGCTTCGGCG GGGTGAAGGC GCTCACCGAC ATCTCGTTCG ACGTGCGCGA GCACGAGATC
CGCTCCATCA TCGGCCCGAA CGGCGCCGGC AAGAGCTCGA TGCTCAACTG CATCAACGGC
GTCTATGCGC CGCAGGAAGG TTCCATCACC TTCCGGGGCA AGACCTTCGC CCACATGAAT
TCGCGCCAGG TGGCCGAGAT GGGCGTGGCG CGCACCTTCC AGAACCTGGC GCTGTTCAAG
GGCATGAGCG TGCTGGACAA CATCATGTCC GGCCGCAACC TGAAGATCCG GAGCAACCTG
CTGATGCAGG CCCTGCGCCT GGGGCCGGCG GTGGCCGAGG AGATCCGCCA CCGCGAAGTG
GTCGAGCGCA TCATCGATTT CCTGGAGATC CAGGCCTGGC GCAAGGCGCC CGTGGGCCAA
TTGCCCTACG GCCTGCAAAA GCGCGTGGAC CTGGGACGGG CCCTGGCCAT GGAGCCGCAG
GTGCTGCTGC TCGACGAGCC CATGGCGGGC ATGAACGTGG AAGAGAAGCA GGACATGTGC
CGCTTCATCC TCGACGTGAA CGACGAGTTC GGCACCACCA TCGTGCTGAT CGAGCACGAC
ATGGGCGTGG TGATGGACAT CTCCGACCGT GTCGTGGTGC TGGACTACGG CAAGAAGATC
GGCGACGGCA CGCCGCAAGC GGTGCGCGAG AACGAAGACG TCATCCGCGC CTACCTCGGC
GCCGGCCACT AG
 
Protein sequence
MTTPSKKTGD VILDVRNISL RFGGVKALTD ISFDVREHEI RSIIGPNGAG KSSMLNCING 
VYAPQEGSIT FRGKTFAHMN SRQVAEMGVA RTFQNLALFK GMSVLDNIMS GRNLKIRSNL
LMQALRLGPA VAEEIRHREV VERIIDFLEI QAWRKAPVGQ LPYGLQKRVD LGRALAMEPQ
VLLLDEPMAG MNVEEKQDMC RFILDVNDEF GTTIVLIEHD MGVVMDISDR VVVLDYGKKI
GDGTPQAVRE NEDVIRAYLG AGH