Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0783 |
Symbol | |
ID | 4669395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 841122 |
End bp | 842444 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639821982 |
Product | hypothetical protein |
Protein accession | YP_969155 |
Protein GI | 120609477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCA GGAAGATCGC ATCGATCGCC GCCGTCCTCG CGGCCGGCCT CTCCGCGCTC GCCACCGCGC CGCTCGCGCA GGCGCAGGCC GCGGGCGAGC AGTTCGTGCC GCTGCTCGTC TACCGCACCG GGCAGTTCGC GCCGCTCGGC ATTCCCTGGG CGGACGGCAA GCAGGACTAC CTCAAGCTGG TGAACACGCG CGACGGCGGC GTGAACGGCG TCAGGCTCTC GTTCGAGGAA TGCGAGACGG CCTACGACGC GGCCAAGGGC GTGGAGTGCT ACGAACGCCT CAAGGGCAAG GGCGGCGGCG CCTCCGGCTT CGACACGCAG TCCACCGGCA TCACCTTCGC GGTGACCGAC AAGGCCTTCG TGGACAAGAT CCCGGTGGAG ACCCCGGGCT ACGGCCTCTC GCAGTCGGCC GACGGCACGG TGTTCGAGTG GAACTTCCCG CTGCTGGGCA CCTACTGGAC CGCCGCCGAC GTGATGCTGC AGGACATCGC CAAGAAGGAA AAGGGCAGCC TCAAGGGCAA GAAGATCGCG CTGGTCTATC ACGACAGCCC GTACGGCAAG GAGCCGATCC CGCTGCTGCA AAAGCGCGCC GAGGCCGACG GCTTCACGCT CTCCACCTTC CCCGTCACGC CGCCCGGCGT GGAGCAGAAA TCCACCTGGC TGCAGATCCG CCAGCAGCGG CCCGACTACG TGCTCTTCTG GTCGGCCGGC GTGATGACGC CCGCCGGCAT CCGCGAGGCG CAGGCCAGCG GCTACCCGCG CGAGAAGATC TACGGCATCT GGTGGGCCGG CTCCGACCAC GACGTGAAGG ACATCGGCGC GGGCGCCAAG GGCTACAACG CCATCACCAT CCACAACAGC GCCGCCAGGG ACAAGGTGCA CGACGACCTG AAGAAGTTCG TCTATGACAA GGGCCAGGGC ACGGGTGCCC CCACGGGCGT GGGCACGCTG GCGCACACGC GCGGGATGAT GATCTCGATG CTGCAGGTGG AGGCGATCCG CGCCGCGCAG GAGAAGTACG GCAAGGGCAA GGTGCTCACG CCCGAGCAGG TGCGCTGGGG CTTCGAGAAC CTGGACCTCA CGGCCGACAA GCTCAAGGCC CTGGGCTTCG GCGAGATCAT GCGCCCGGTG AAGACCTCCT GCCAGAACCA CATGGGCACC GACTGGGCGC GCATCGTGCA GTGGGACGGC GGCAAGTGGA ACCTCGCTTC GGACTGGTAC CAGGCCGACA AGACGCACAT CGATCCGCTG GTGAAGGAGT ACGCGGCGAA GTACGCGAAG GACAAGAACA TCAAGCCGAG GAACTGTAGC TAA
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Protein sequence | MQPRKIASIA AVLAAGLSAL ATAPLAQAQA AGEQFVPLLV YRTGQFAPLG IPWADGKQDY LKLVNTRDGG VNGVRLSFEE CETAYDAAKG VECYERLKGK GGGASGFDTQ STGITFAVTD KAFVDKIPVE TPGYGLSQSA DGTVFEWNFP LLGTYWTAAD VMLQDIAKKE KGSLKGKKIA LVYHDSPYGK EPIPLLQKRA EADGFTLSTF PVTPPGVEQK STWLQIRQQR PDYVLFWSAG VMTPAGIREA QASGYPREKI YGIWWAGSDH DVKDIGAGAK GYNAITIHNS AARDKVHDDL KKFVYDKGQG TGAPTGVGTL AHTRGMMISM LQVEAIRAAQ EKYGKGKVLT PEQVRWGFEN LDLTADKLKA LGFGEIMRPV KTSCQNHMGT DWARIVQWDG GKWNLASDWY QADKTHIDPL VKEYAAKYAK DKNIKPRNCS
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