Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0758 |
Symbol | |
ID | 4666207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 813082 |
End bp | 813807 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639821957 |
Product | pirin domain-containing protein |
Protein accession | YP_969130 |
Protein GI | 120609452 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.966518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.401977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGACA TCCGCAAAGC CCAACACCGC GGCACTGCCA ACCATGGCTG GCTGCACTCC CGCCACACGT TCTCGTTCGG CCACTACCGC GATGCGAACC AGCAGGGTTT CTCCGACCTG CTCGTGATCA ACGATGACCG CGTGGCGCCT TCGAAGGGCT TCGGCACCCA TGGCCACCGC GACATGGAAA TCTTCTCCTA TGTGCTCGAC GGCGCGCTGC AGCACAAGGA TTCGATGGGC ACGGGCTCGG TGATCCGCCC CGGCGACGTG CAGATGATGA GCGCCGGCAG CGGCGTGCAG CACAGCGAGT TCAACCATTC GCCCGAAGAG CCCGTGCACT TCCTGCAGAT CTGGATCGTG CCGAACAAGG TCGGTGTCCA GCCGCGCTAC CAGCAGGTGC ACTTCACCGA AGCCGACAAG CGCGGCCGGC TGCGCCAGAT CATCTCGCCG GAGGGCACGA ACGGATCGCT GGCCGTGCAC CAGGACGCCC GGGTCTATGC CGGCCTGTTC GACGGGGACG AGTCTGCCGA CCTGGCCGTG GGCGCCAACC GCAACGTCTA TGTGCATGTG GCCCGCGGCA GCGTCGAGGT GAACGGCGAG CGGCTGGACG AAGGCGACGG CGCCCGCATC CGCAACGCCG GCGACCTGCA TTTCGCCAAG GGCGAGGACG CCGAGGTGCT GGTGTTCGAC CTGCGGCCCA ACGAGCTGCC CACGATGCCC CATTGA
|
Protein sequence | MIDIRKAQHR GTANHGWLHS RHTFSFGHYR DANQQGFSDL LVINDDRVAP SKGFGTHGHR DMEIFSYVLD GALQHKDSMG TGSVIRPGDV QMMSAGSGVQ HSEFNHSPEE PVHFLQIWIV PNKVGVQPRY QQVHFTEADK RGRLRQIISP EGTNGSLAVH QDARVYAGLF DGDESADLAV GANRNVYVHV ARGSVEVNGE RLDEGDGARI RNAGDLHFAK GEDAEVLVFD LRPNELPTMP H
|
| |