| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0755 |
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| Symbol | |
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| ID | 4666190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 809878 |
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| End bp | 810894 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639821954 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_969127 |
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| Protein GI | 120609449 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.190213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.863428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCC ACGCAGCTTT CAAGACGTTC GCGCTGGCCA CCGCCCTGGC TGCCGTGCTG
GCCGCGCCCG CCGCGGCGCA GGTGCGCGAG CGCACCTTCA AGATCGGCAC CGGCATCAGC
GACGACCATC CGCAGGCCCA CGCGTCGCGG CACTTCGACG AGGTCCTCGC GGCCAAAAGC
GGCGGCAAGA TGCGCGCCAG GCTCTTCGCC AACGGCACGC TGGGCAACGA TGTCACCATG
ATCTCCGCAC TGCGCGGCGG CACCCTGGAG ATGACGGTGC CCGACAGCTC CACCCTGGTG
CCGGTGGTCA AGGACTTCGG CGTGCTGAAC CTGCCGCTCA CCTTCAATAC CAGCGAGGAA
GCCGACGCCG TGCTCGACAG CGCCTTCGGC AGGAAGCTGC TCGCCAGGCT GCCCGAGAAG
GGCCTGGTCG GCCTCGGCTA CTGGGAGAAC GGCTTCCGCC AGACCACCAA CTCGCGCCGC
CCCATCCAGA AGGCCGAAGA CTTCGCCGGC CTGAAGGTCC GCGTGATCCA GAACCAGCTG
TTCATCGACA GCTTCAACGC GCTCGGCGCC AACGCCACGC CCATGCCCTT CACCGAGCTG
TACTCGGCCA TGGAACAGAA GGCGGTGGAT GGCCAGGAGA ACCCGACCGC GACCATCCTG
ACCAGCAAGT TCTACGAGGT GCAGAAGCAC CTGGTCCTGT CGCGCCACAT CTACAGCACC
TGGGTGCTGC TGATGTCGAA AAAGACCTGG GACACCCTCT CCCCCGAGGA GCAGAAGATC
GTGCAGGAGG CCGCCAACGA AGCCACCGCG TTCGAGCGCA AGGCCATCCG CGCTCTGGAA
GCCAAGGCGC TCGGCGAGCT GAAGAAGCTC GGCATGCAGG TGACCGAACT GCCCGCCGCG
GAGCAGGCCC AGCTGCGCGA CAAGCTGCAG CCCGTGGTCG CCAGGTACAG CAAGGAATTC
GGCGAGGACA CCACCCGCGA AATGATGGCC GAGCTGGAAA AGGCCCGCCG CAAGTAA
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| Protein sequence | MQFHAAFKTF ALATALAAVL AAPAAAQVRE RTFKIGTGIS DDHPQAHASR HFDEVLAAKS
GGKMRARLFA NGTLGNDVTM ISALRGGTLE MTVPDSSTLV PVVKDFGVLN LPLTFNTSEE
ADAVLDSAFG RKLLARLPEK GLVGLGYWEN GFRQTTNSRR PIQKAEDFAG LKVRVIQNQL
FIDSFNALGA NATPMPFTEL YSAMEQKAVD GQENPTATIL TSKFYEVQKH LVLSRHIYST
WVLLMSKKTW DTLSPEEQKI VQEAANEATA FERKAIRALE AKALGELKKL GMQVTELPAA
EQAQLRDKLQ PVVARYSKEF GEDTTREMMA ELEKARRK
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