Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0728 |
Symbol | |
ID | 4665329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 781771 |
End bp | 782040 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639821929 |
Product | putative conjugal transfer TrbD transmembrane protein |
Protein accession | YP_969102 |
Protein GI | 120609424 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5268] Type IV secretory pathway, TrbD component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGG CCACTGATCT TCCGGGCTTT GAAGTGCCGC TGCATCGCTC GCTGACCGAG CCGATCCTGC TGGGCGGTGC GCCGCGCACC GTGGCGATTG CCAACGGCAC GCTGGCCGCC GCCGTCGGGC TGGGCCTGCA ACTGTGGATT CCCGGCGTGG TGCTGTGGAT CGCCGGCCAT TCGCTGGCGG TGTGGGGTGC TCGTGTCGAT CCGCAGTTCA TGCAGGTCTT CGCTCGGCAC ATCAAGCACA AGCCGCTACT GGACGTATAG
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Protein sequence | MSKATDLPGF EVPLHRSLTE PILLGGAPRT VAIANGTLAA AVGLGLQLWI PGVVLWIAGH SLAVWGARVD PQFMQVFARH IKHKPLLDV
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