Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0696 |
Symbol | |
ID | 4667008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 755815 |
End bp | 756645 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639821898 |
Product | AraC family transcriptional regulator |
Protein accession | YP_969071 |
Protein GI | 120609393 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACA ACGCATACGC CACTTCCGAC AAAATGACCA TGGGCTCAGA TACCGGGCAG CGCACGCCAT TGCTTCCGGA TTCCGTGACA GTGAAAGTCG TGCAACTGCC CGAGGGTGCA GACTTTCCGA CAGAGCAGCA CCCTTGGGGA CAATTCGTCT ACCCCCGTGC TGGTGTCATC GAGTTGACCG TCAAGAGCAA CCGCTATGCA GCCCCGCCAG ACTTTGGCGT GTGGTTGCCG CCCGGGACTG AACATGTCGC GAGGGCTGAT GGCGAGACCT CCTACTTTGT CTTGGACATC GACGCCGACC TGTGCGCTCG CCTTCCCCGA CGCGCCAGTG TTCTTTCTGT GAGTGCTATC GCAAAGGCAG TATTTCTGGA CTTGCAGAAG CGGCAAGTGC GCAAGCCCCA AAGCCCGGAG GATGTCCGGT TGATGGAGGT GCTGATCGAT CAGCTAAGTG CCAGCGTGCC GGTGGATAGC TTCCTCCCGA TGTCGAGTGA TGCCGCACTT CGGAATGTGC TGGAGGCACT CTGCAAGAAC CCTGGCGATA GCCGGACGCT CGTTGAATGG GCCAGGTATG TCCACAGCAC AGAGCGCACA TTGGCAAGGC GGTGTACCCG CGACCTCGGC ATGACCTTCT TGGAATGGCG GCAGCGGCTT CGGTTGTCAC GCGCATTTGC CATGCTGGCG GACGGTCTTG CTGTTCAAGT GGTTGCGCAA CAGCTTGGCT ATGGCACAAC CTCGGCATTC ATCGCGATGT TTCAGAAAAC GATTGGCACT ACGCCGAACA CATTCCGAGG GCGATTGCGG GATGGTGCGG AGCAGCGCTA G
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Protein sequence | MQDNAYATSD KMTMGSDTGQ RTPLLPDSVT VKVVQLPEGA DFPTEQHPWG QFVYPRAGVI ELTVKSNRYA APPDFGVWLP PGTEHVARAD GETSYFVLDI DADLCARLPR RASVLSVSAI AKAVFLDLQK RQVRKPQSPE DVRLMEVLID QLSASVPVDS FLPMSSDAAL RNVLEALCKN PGDSRTLVEW ARYVHSTERT LARRCTRDLG MTFLEWRQRL RLSRAFAMLA DGLAVQVVAQ QLGYGTTSAF IAMFQKTIGT TPNTFRGRLR DGAEQR
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