| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0686 |
|---|
| Symbol | |
|---|
| ID | 4666777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 746552 |
|---|
| End bp | 747397 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639821888 |
|---|
| Product | putative replication initiator and transcription repressor protein |
|---|
| Protein accession | YP_969061 |
|---|
| Protein GI | 120609383 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5534] Plasmid replication initiator protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCC CGCCAGGGCA AGCCTTGCCG CAGCGCGAAC AGCTCGACCT GTTCCGCGCG
CTGCCGGGCG ACATGGCACC CCGCGACAGC CAGGACTTGA TGGCCTTTCC GTTCTTCTCG
CTCTCCAAGT CGCGGCGCAT CGCGCCGATC GACTTCCGCG CCGGCGGCAT CACCATCCGC
GTGGAAGGCA CGCAAGAGCA TGGCATAGCG ACCATTTGGG ATGCGGACGT TTTGATATGG
GCCGCCTCGC AGATCGTGGA GGCGCGCGAC GCGGGCATCC GCCCGTCGCG CTGGATACGC
GCCACCCCCT ACGAGATCCT GCGCTTCATC GGACGCAGCA CGTCGCTCAA CGACTACCTG
CGGCTGAAAG CCGCGCTCGA CCGGCTGCAA TCGACCACGG TGGCCACGTC CATCCGCGAA
ACCACGGGAA GGCGATTGCA TCGCTTCTCG TGGATCAACG AGTGGAAGGA ACTGGCCGAT
GCCAGCGGCG TGCCGCTGGG CATCGAACTG ATCCTGCCGG ACTGGTTCTA TGCGGGCGTG
CTCGATGCCG CCCTGGTGCT GACCATCGAC CCGGCCTATT TCCGCTTGAA GGGCGGCATC
GAACGCTGGC TGTACCGCCT GGTGCGCAAG CACGGCGGCA AGCAGCCGGG CGGCTGGCAA
TTCGACTTTC GGCACCTGCA CCGCAAGTCG GGCAGCGCTG CGCGCTTCTC CGACTTCGCC
TACGACCTGC GCGTCCTGGT GGCGCGGCAG TCGCTGCCCG GCTACGTCCT GGGCATCGAG
CGGATGCCGG ACGACGGGAT GGAGCTGCTG ACGTTTCGGC CCGTGCTGCA CACGGCACGG
GGATAA
|
|---|
| Protein sequence | MSSPPGQALP QREQLDLFRA LPGDMAPRDS QDLMAFPFFS LSKSRRIAPI DFRAGGITIR
VEGTQEHGIA TIWDADVLIW AASQIVEARD AGIRPSRWIR ATPYEILRFI GRSTSLNDYL
RLKAALDRLQ STTVATSIRE TTGRRLHRFS WINEWKELAD ASGVPLGIEL ILPDWFYAGV
LDAALVLTID PAYFRLKGGI ERWLYRLVRK HGGKQPGGWQ FDFRHLHRKS GSAARFSDFA
YDLRVLVARQ SLPGYVLGIE RMPDDGMELL TFRPVLHTAR G
|
|---|
| |